RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PAX8Q06710 450 aa11□□□□□ -0.65
SDC2-201ENST00000302190 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
SDC2-201ENST00000302190 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
SDC2-201ENST00000302190 BEX4Q9NWD9 120 aaPredicted RBP11□□□□□ -0.65
SDC2-201ENST00000302190 IGKCP01834 107 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 TTC9CQ8N5M4 171 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 NPFFR1Q9GZQ6 430 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 F6UB75 175 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 DPM2O94777 84 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 MAPK1IP1LQ8NDC0 245 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 H3BRM9 83 aa10.99□□□□□ -0.65
SDC2-201ENST00000302190 KLF5Q13887 457 aaPredicted RBP10.99□□□□□ -0.65
SDC2-201ENST00000302190 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
SDC2-201ENST00000302190 CD7P09564 240 aa10.98□□□□□ -0.65
SDC2-201ENST00000302190 ASIPP42127 132 aa10.98□□□□□ -0.65
SDC2-201ENST00000302190 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
SDC2-201ENST00000302190 TMEM8BA6NDV4 472 aa10.98□□□□□ -0.65
SDC2-201ENST00000302190 FOXE3Q13461 319 aa10.98□□□□□ -0.65
SDC2-201ENST00000302190 ADAMTSL5Q6ZMM2 481 aa10.98□□□□□ -0.65
SDC2-201ENST00000302190 NBPF19A0A087WUL8 3843 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
SDC2-201ENST00000302190 A0A087WWL8 130 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 SMAD7O15105 426 aaKnown RBP10.97□□□□□ -0.65
SDC2-201ENST00000302190 ATP5LO75964 103 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 ZNF688P0C7X2 276 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 COX8AP10176 69 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 GNLYP22749 145 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 C3orf36Q3SXR2 165 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 KLF12Q9Y4X4 402 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 H3BUX3 64 aa10.97□□□□□ -0.65
SDC2-201ENST00000302190 TRAV41A0A0B4J266 112 aa10.96□□□□□ -0.65
SDC2-201ENST00000302190 PSMB11A5LHX3 300 aa10.96□□□□□ -0.65
SDC2-201ENST00000302190 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.65
SDC2-201ENST00000302190 FCN3O75636 299 aa10.96□□□□□ -0.65
SDC2-201ENST00000302190 MLST8Q9BVC4 326 aa10.96□□□□□ -0.65
SDC2-201ENST00000302190 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.65
SDC2-201ENST00000302190 A0A1B0GWB2 263 aa10.96□□□□□ -0.66
SDC2-201ENST00000302190 A0A1B0GXF2 115 aa10.96□□□□□ -0.66
SDC2-201ENST00000302190 DTX2Q86UW9 622 aa10.96□□□□□ -0.66
SDC2-201ENST00000302190 BBC3Q96PG8 261 aaPredicted RBP10.96□□□□□ -0.66
SDC2-201ENST00000302190 RNF5Q99942 180 aa10.96□□□□□ -0.66
SDC2-201ENST00000302190 SCRT2Q9NQ03 307 aa10.96□□□□□ -0.66
SDC2-201ENST00000302190 IGHV3-73A0A0B4J1V6 119 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
SDC2-201ENST00000302190 SLC50A1Q9BRV3 221 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 MRPL35Q9NZE8 188 aaKnown RBP10.95□□□□□ -0.66
SDC2-201ENST00000302190 CRYGCP07315 174 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 CTSGP08311 255 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 AMTNQ6UX39 209 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 LINC00477Q96M19 166 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 PRORYQ9H606 182 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 SMPXQ9UHP9 88 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 LINC01548A6NM66 108 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
SDC2-201ENST00000302190 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 A0A1W2PPM0 123 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 PDE6HQ13956 83 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 OR4X2Q8NGF9 303 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 CFHR4Q92496 578 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 OVOL3O00110 214 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 HERVK_113P61574 105 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 SRSF1Q07955 248 aaKnown RBP eCLIP10.94□□□□□ -0.66
SDC2-201ENST00000302190 LAGE3Q14657 143 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 UFSP1Q6NVU6 142 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 CRIP1P50238 77 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 FANCD2OSQ96PS1 177 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 KIR2DL4Q99706 377 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 PRSS22Q9GZN4 317 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 SS18L2Q9UHA2 77 aa10.94□□□□□ -0.66
SDC2-201ENST00000302190 ACANP16112 2415 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 IGKV3D-20A0A0C4DH25 116 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 DPF1Q92782 380 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 CHAC1Q9BUX1 264 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 NPFFO15130 113 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 ZFP36P26651 326 aaKnown RBP10.93□□□□□ -0.66
SDC2-201ENST00000302190 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 IGHV7-81A0A0B4J1V7 117 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 ZNF815PA8K554 130 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 HECTD1Q9ULT8 2610 aa10.93□□□□□ -0.66
SDC2-201ENST00000302190 DOPEY1Q5JWR5 2465 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 ZANQ9Y493 2812 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 M0R1W7 72 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 LINC00574Q9H8X3 128 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 PSMG4Q5JS54 123 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 OR9G4Q8NGQ1 327 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 CCL19Q99731 98 aa10.92□□□□□ -0.66
SDC2-201ENST00000302190 ID1P41134 155 aa10.91□□□□□ -0.66
SDC2-201ENST00000302190 GAS8-AS1O95177 125 aa10.91□□□□□ -0.66
SDC2-201ENST00000302190 ADORA2A-AS1P86434 159 aa10.91□□□□□ -0.66
SDC2-201ENST00000302190 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
SDC2-201ENST00000302190 IGLV11-55A0A075B6I3 123 aa10.91□□□□□ -0.66
SDC2-201ENST00000302190 TRAV21A0A0B4J279 112 aa10.91□□□□□ -0.66
SDC2-201ENST00000302190 A0A0U1RRA0 63 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms