RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 SH2D1AO60880 128 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 ZNF324O75467 553 aaPredicted RBP10.99□□□□□ -0.65
UBXN1-202ENST00000301935 P01737 135 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 CRIP1P50238 77 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 ERVFC1-1P60608 527 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 RHEBQ15382 184 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
UBXN1-202ENST00000301935 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 XCL2Q9UBD3 114 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 GOLT1BQ9Y3E0 138 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 TRAV12-2A0A075B6T6 113 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 TRAV12-3A0A0B4J271 114 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 H7BYZ3 331 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 J3KRW8 73 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 ZNF80P51504 273 aaPredicted RBP10.98□□□□□ -0.65
UBXN1-202ENST00000301935 FXYD7P58549 80 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 RPS20P60866 119 aaKnown RBP10.98□□□□□ -0.65
UBXN1-202ENST00000301935 BTN1A1Q13410 526 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 OR5I1Q13606 314 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 Q6ZWC4 215 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 NUDT10Q8NFP7 164 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 OR10G8Q8NGN5 311 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
UBXN1-202ENST00000301935 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
UBXN1-202ENST00000301935 GIG44P09565 113 aaPredicted RBP10.97□□□□□ -0.65
UBXN1-202ENST00000301935 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 CT83Q5H943 113 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 PRR9Q5T870 116 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 CLRN3Q8NCR9 226 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
UBXN1-202ENST00000301935 A0A087WWC5 75 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 TMEM189A5PLL7 270 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 A8MWL6 223 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 ATP6V1G1O75348 118 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 ORM1P02763 201 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 CXCL1P09341 107 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 TMEM208Q9BTX3 173 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
UBXN1-202ENST00000301935 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
UBXN1-202ENST00000301935 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
UBXN1-202ENST00000301935 ZNF705GA8MUZ8 300 aaPredicted RBP10.95□□□□□ -0.66
UBXN1-202ENST00000301935 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
UBXN1-202ENST00000301935 LINC01587Q99440 93 aa10.95□□□□□ -0.66
UBXN1-202ENST00000301935 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
UBXN1-202ENST00000301935 TP53TG1Q9Y2A0 90 aa10.95□□□□□ -0.66
UBXN1-202ENST00000301935 FAM231BA6NCW3 169 aa10.94□□□□□ -0.66
UBXN1-202ENST00000301935 SMIM9A6NGZ8 99 aa10.94□□□□□ -0.66
UBXN1-202ENST00000301935 ANXA2RQ3ZCQ2 193 aa10.94□□□□□ -0.66
UBXN1-202ENST00000301935 RNF212Q495C1 297 aa10.94□□□□□ -0.66
UBXN1-202ENST00000301935 OR2D3Q8NGH3 330 aa10.94□□□□□ -0.66
UBXN1-202ENST00000301935 NEU1Q99519 415 aa10.94□□□□□ -0.66
UBXN1-202ENST00000301935 TRGV11A0A075B6L2 103 aa10.93□□□□□ -0.66
UBXN1-202ENST00000301935 C7orf77A4D0Y5 90 aa10.93□□□□□ -0.66
UBXN1-202ENST00000301935 DNLZQ5SXM8 178 aa10.93□□□□□ -0.66
UBXN1-202ENST00000301935 ZNF705AQ6ZN79 300 aaPredicted RBP10.93□□□□□ -0.66
UBXN1-202ENST00000301935 C1orf158Q8N1D5 194 aa10.93□□□□□ -0.66
UBXN1-202ENST00000301935 GFRA4Q9GZZ7 299 aa10.93□□□□□ -0.66
UBXN1-202ENST00000301935 V9GYV3 84 aa10.93□□□□□ -0.66
UBXN1-202ENST00000301935 IGKV3D-20A0A0C4DH25 116 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 A0A1W2PPQ1 181 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 ZNF493Q6ZR52 646 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 RNF183Q96D59 192 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 IMMP2LQ96T52 175 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 RPS10P5Q9NQ39 176 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 C11orf21Q9P2W6 132 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 TP53TG3Q9ULZ0 132 aa10.92□□□□□ -0.66
UBXN1-202ENST00000301935 CXorf65A6NEN9 183 aa10.91□□□□□ -0.66
UBXN1-202ENST00000301935 CBY3A6NI87 242 aa10.91□□□□□ -0.66
UBXN1-202ENST00000301935 RBMY1A1P0DJD3 496 aaKnown RBP10.91□□□□□ -0.66
UBXN1-202ENST00000301935 RBMY1CP0DJD4 496 aa10.91□□□□□ -0.66
UBXN1-202ENST00000301935 RBMY1FQ15415 496 aaKnown RBP10.91□□□□□ -0.66
UBXN1-202ENST00000301935 MUC21Q5SSG8 566 aa10.91□□□□□ -0.66
UBXN1-202ENST00000301935 OVOL2Q9BRP0 275 aa10.91□□□□□ -0.66
UBXN1-202ENST00000301935 KRTAP17-1Q9BYP8 105 aa10.91□□□□□ -0.66
UBXN1-202ENST00000301935 F2Z2F3 143 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 SPRY2O43597 315 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 LY6G6CO95867 125 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 S100A4P26447 101 aaKnown RBP10.9□□□□□ -0.66
UBXN1-202ENST00000301935 ASIPP42127 132 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
UBXN1-202ENST00000301935 RRN3P1Q2M238 152 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 KMT2AQ03164 3969 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 HERC2O95714 4834 aa10.9□□□□□ -0.66
UBXN1-202ENST00000301935 IGHV3OR16-12A0A075B7B8 117 aa10.89□□□□□ -0.67
UBXN1-202ENST00000301935 NUPR2A6NF83 97 aa10.89□□□□□ -0.67
UBXN1-202ENST00000301935 S100PP25815 95 aa10.89□□□□□ -0.67
UBXN1-202ENST00000301935 RPL19P84098 196 aaKnown RBP10.89□□□□□ -0.67
UBXN1-202ENST00000301935 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms