RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 RPS10P5Q9NQ39 176 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 MANBALQ9NQG1 85 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 FAT2Q9NYQ8 4349 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 A0A087WWC5 75 aa12.71□□□□□ -0.37
TMEM88-201ENST00000301599 MT-ND4LP03901 98 aa12.71□□□□□ -0.37
TMEM88-201ENST00000301599 HOXA5P20719 270 aa12.71□□□□□ -0.37
TMEM88-201ENST00000301599 ZNF138P52744 262 aa12.71□□□□□ -0.37
TMEM88-201ENST00000301599 RANP62826 216 aaKnown RBP12.71□□□□□ -0.37
TMEM88-201ENST00000301599 SSX7Q7RTT5 188 aa12.71□□□□□ -0.37
TMEM88-201ENST00000301599 TXNDC17Q9BRA2 123 aa12.71□□□□□ -0.37
TMEM88-201ENST00000301599 TRGV2A0A075B6R0 118 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 A0A0J9YY99 117 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
TMEM88-201ENST00000301599 BCL2P10415 239 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 C11orf72Q8NBR9 251 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 C18orf15Q96N68 181 aa12.7□□□□□ -0.38
TMEM88-201ENST00000301599 C7orf77A4D0Y5 90 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 MAP1LC3B2A6NCE7 125 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 C9JQL5 133 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 TAS2R45P59539 299 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 TVP23CQ96ET8 276 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 MAP1LC3BQ9GZQ8 125 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 Q9H8V8 135 aa12.69□□□□□ -0.38
TMEM88-201ENST00000301599 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 TRGV1A0A0A0MS02 117 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 RBAKDNA6NC62 111 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 RAB5BP61020 215 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
TMEM88-201ENST00000301599 Q9H3A6 140 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 GNG13Q9P2W3 67 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 KLF12Q9Y4X4 402 aa12.68□□□□□ -0.38
TMEM88-201ENST00000301599 TMEM250H0YL14 139 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 SPINK4O60575 86 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 MED14OSP0DP75 135 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 TCL1AP56279 114 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 UBE2L3P68036 154 aaKnown RBP12.67□□□□□ -0.38
TMEM88-201ENST00000301599 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 C6orf223Q8N319 242 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 TMEM242Q9NWH2 141 aa12.67□□□□□ -0.38
TMEM88-201ENST00000301599 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
TMEM88-201ENST00000301599 ESRGQ1W209 222 aa12.66□□□□□ -0.38
TMEM88-201ENST00000301599 PRR9Q5T870 116 aa12.66□□□□□ -0.38
TMEM88-201ENST00000301599 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
TMEM88-201ENST00000301599 A0A1W2PPV4 95 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 CCL20P78556 96 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 Q6ZQT7 251 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 VSIG2Q96IQ7 327 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 CTDSP1Q9GZU7 261 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 LENEPQ9Y5L5 61 aa12.65□□□□□ -0.38
TMEM88-201ENST00000301599 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
TMEM88-201ENST00000301599 COLCA2A8K830 154 aa12.64□□□□□ -0.39
TMEM88-201ENST00000301599 Q8TAT8 98 aa12.64□□□□□ -0.39
TMEM88-201ENST00000301599 UPK3BQ9BT76 320 aa12.64□□□□□ -0.39
TMEM88-201ENST00000301599 OTORQ9NRC9 128 aa12.64□□□□□ -0.39
TMEM88-201ENST00000301599 A0A1B0GV50 99 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 PGPA6NDG6 321 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
TMEM88-201ENST00000301599 MEF2BQ02080 365 aaPredicted RBP12.63□□□□□ -0.39
TMEM88-201ENST00000301599 SLAQ13239 276 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 TTC32Q5I0X7 151 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 PQLC2Q6ZP29 291 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 CMTM2Q8TAZ6 248 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 MRPS16Q9Y3D3 137 aaKnown RBP12.63□□□□□ -0.39
TMEM88-201ENST00000301599 PKD1P98161 4303 aa12.63□□□□□ -0.39
TMEM88-201ENST00000301599 A0A096LPF7 62 aa12.62□□□□□ -0.39
TMEM88-201ENST00000301599 PDE6DO43924 150 aa12.62□□□□□ -0.39
TMEM88-201ENST00000301599 TNP2Q05952 138 aa12.62□□□□□ -0.39
TMEM88-201ENST00000301599 ZNF415Q09FC8 603 aa12.62□□□□□ -0.39
TMEM88-201ENST00000301599 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
TMEM88-201ENST00000301599 CYB561D1Q8N8Q1 229 aa12.62□□□□□ -0.39
TMEM88-201ENST00000301599 F6UZH7 168 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 PAX4O43316 350 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 ZNF726P1Q15940 193 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 Q6AWC8 147 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 KRTAP17-1Q9BYP8 105 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 MRPL16Q9NX20 251 aaKnown RBP12.61□□□□□ -0.39
TMEM88-201ENST00000301599 NAT8Q9UHE5 227 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 ARL2-SNX15V9GYD0 113 aa12.61□□□□□ -0.39
TMEM88-201ENST00000301599 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMEM88-201ENST00000301599 CXorf1O96002 111 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 FAM159AQ6UWV7 190 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 HIST1H2BAQ96A08 127 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 SPXQ9BT56 116 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 HHLA3Q9XRX5 114 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 DNAH11Q96DT5 4516 aa12.6□□□□□ -0.39
TMEM88-201ENST00000301599 PKHD1P08F94 4074 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms