RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GNRH2O43555 120 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 GNLYP22749 145 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 TMEM95Q3KNT9 176 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 HOXA3O43365 443 aaPredicted RBP10.39□□□□□ -0.75
CASC4-201ENST00000299957 CTSGP08311 255 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 PIMREGQ9BSJ6 248 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 IGHV2-70DA0A0C4DH43 119 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 SP5Q6BEB4 398 aaPredicted RBP10.39□□□□□ -0.75
CASC4-201ENST00000299957 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 KLK9Q9UKQ9 250 aa10.39□□□□□ -0.75
CASC4-201ENST00000299957 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 KAAG1Q9UBP8 84 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 SLC25A16P16260 332 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 SNRPD3P62318 126 aaKnown RBP10.38□□□□□ -0.75
CASC4-201ENST00000299957 PDE6HQ13956 83 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 GAS8-AS1O95177 125 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 CTRLP40313 264 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 FXYD2P54710 66 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 RNASE13Q5GAN3 156 aaKnown RBP10.38□□□□□ -0.75
CASC4-201ENST00000299957 TMEM14CQ9P0S9 112 aa10.38□□□□□ -0.75
CASC4-201ENST00000299957 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 ANXA2RQ3ZCQ2 193 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
CASC4-201ENST00000299957 RNF5Q99942 180 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 ADARB2-AS1A8MUL3 147 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 MRPL52Q86TS9 123 aaKnown RBP10.37□□□□□ -0.75
CASC4-201ENST00000299957 KLF12Q9Y4X4 402 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 A0A1B0GXF2 115 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 Q8NA96 180 aa10.37□□□□□ -0.75
CASC4-201ENST00000299957 IGHV7-81A0A0B4J1V7 117 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 ZFP36P26651 326 aaKnown RBP10.36□□□□□ -0.75
CASC4-201ENST00000299957 CRIP1P50238 77 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 UCNP55089 124 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 SPINK13Q1W4C9 94 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 ZNF876PQ49A33 203 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 ZNF625Q96I27 306 aaPredicted RBP10.36□□□□□ -0.75
CASC4-201ENST00000299957 MLST8Q9BVC4 326 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
CASC4-201ENST00000299957 RPL13AP40429 203 aaKnown RBP10.36□□□□□ -0.75
CASC4-201ENST00000299957 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 KLHL30-AS1Q8NEE0 82 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 SCRT2Q9NQ03 307 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 SYT8Q8NBV8 401 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 DUX3Q96PT4 197 aa10.36□□□□□ -0.75
CASC4-201ENST00000299957 LINC01545Q5VT33 79 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 A0A1B0GV72 72 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
CASC4-201ENST00000299957 VCX2Q9H322 139 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 K7ENP7 123 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 M0R1W7 72 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 IGF1P05019 195 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 SYNJ2BPP57105 145 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 BLCAPP62952 87 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 LGALS9BQ3B8N2 356 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 LGALS9CQ6DKI2 356 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 PHLDA1Q8WV24 401 aaPredicted RBP10.35□□□□□ -0.75
CASC4-201ENST00000299957 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
CASC4-201ENST00000299957 TSSC4Q9Y5U2 329 aaPredicted RBP10.35□□□□□ -0.75
CASC4-201ENST00000299957 Q8N976 141 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 COL12A1Q99715 3063 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 Q6ZQT7 251 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 NRGNQ92686 78 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 SPXQ9BT56 116 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 PRSS22Q9GZN4 317 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 PRO3102Q9H379 93 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 TP53TG1Q9Y2A0 90 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 MOB4Q9Y3A3 225 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 TEX48A0A1B0GUV7 120 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 CRYGCP07315 174 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
CASC4-201ENST00000299957 TRAV8-2A0A0B4J237 113 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 H7C1H1 209 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 SIGMAR1Q99720 223 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 H3BRM9 83 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 PAX2Q02962 417 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 AKAP13Q12802 2813 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 IGLV11-55A0A075B6I3 123 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 MINOS1Q5TGZ0 78 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 LINC01587Q99440 93 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 MINOS1-NBL1R4GNA1 71 aa10.33□□□□□ -0.76
CASC4-201ENST00000299957 AGRNO00468 2067 aa10.32□□□□□ -0.76
CASC4-201ENST00000299957 TRBV12-3P01733 135 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms