RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 PCNX1Q96RV3 2341 aa14.65□□□□□ -0.06
TRA2A-201ENST00000297071 AZU1P20160 251 aa14.65□□□□□ -0.06
TRA2A-201ENST00000297071 RPL32P62910 135 aaKnown RBP14.65□□□□□ -0.06
TRA2A-201ENST00000297071 LINC00477Q96M19 166 aa14.65□□□□□ -0.06
TRA2A-201ENST00000297071 CCDC140Q96MF4 163 aa14.65□□□□□ -0.06
TRA2A-201ENST00000297071 TMEM238LA0A1B0GVL6 79 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 A6NJY4 79 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 UFC1Q9Y3C8 167 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 ARHGAP32A7KAX9 2087 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 SUMO2P61956 95 aaKnown RBP14.64□□□□□ -0.07
TRA2A-201ENST00000297071 LCNL1Q6ZST4 164 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 POM121L12Q8N7R1 296 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 SCGB3A1Q96QR1 104 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 DPH3P1Q9H4G8 78 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 SELENOKQ9Y6D0 94 aa14.64□□□□□ -0.07
TRA2A-201ENST00000297071 TRBV7-9A0A0J9YWB2 115 aa14.63□□□□□ -0.07
TRA2A-201ENST00000297071 ITLN2Q8WWU7 325 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-201ENST00000297071 TSSC4Q9Y5U2 329 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-201ENST00000297071 RP1L1Q8IWN7 2480 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-201ENST00000297071 HOXA3O43365 443 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-201ENST00000297071 UBE2E1P51965 193 aa14.62□□□□□ -0.07
TRA2A-201ENST00000297071 EFNA4P52798 201 aa14.62□□□□□ -0.07
TRA2A-201ENST00000297071 SPAG8Q99932 426 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-201ENST00000297071 IGHV1-69DA0A0B4J2H0 117 aa14.62□□□□□ -0.07
TRA2A-201ENST00000297071 PAPPA-AS1Q5QFB9 102 aa14.62□□□□□ -0.07
TRA2A-201ENST00000297071 TRAV21A0A0B4J279 112 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 H3BMG7 143 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 OVOL1O14753 267 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 ATP6V0E1O15342 81 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 ZZEF1O43149 2961 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 LGALS1P09382 135 aaKnown RBP14.61□□□□□ -0.07
TRA2A-201ENST00000297071 CRIP2P52943 208 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-201ENST00000297071 APRG1Q8IVJ8 170 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 GLMPQ8WWB7 406 aa14.61□□□□□ -0.07
TRA2A-201ENST00000297071 TRAV26-2A0A0B4J265 109 aa14.6□□□□□ -0.07
TRA2A-201ENST00000297071 MORN3Q6PF18 240 aaPredicted RBP14.6□□□□□ -0.07
TRA2A-201ENST00000297071 CLEC19AQ6UXS0 136 aa14.6□□□□□ -0.07
TRA2A-201ENST00000297071 RASL10AQ92737 203 aa14.6□□□□□ -0.07
TRA2A-201ENST00000297071 RAXQ9Y2V3 346 aa14.6□□□□□ -0.07
TRA2A-201ENST00000297071 H3BVH4 76 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 UBE2D1P51668 147 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 PRR30Q53SZ7 412 aaPredicted RBP14.59□□□□□ -0.07
TRA2A-201ENST00000297071 LYRM7Q5U5X0 104 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 AJUBAQ96IF1 538 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 CYSRT1A8MQ03 144 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 ECSCRQ19T08 205 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 BAALCQ8WXS3 180 aa14.59□□□□□ -0.07
TRA2A-201ENST00000297071 IGHV3OR16-8A0A075B7F1 116 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 IGHV3-35A0A0C4DH35 117 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 A0A1B0GV72 72 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 FAM223BA6NKX1 122 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 COX6B1P14854 86 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 TCTEX1D4Q5JR98 221 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 FAM223AQ8IWN6 122 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 APC2O95996 2303 aa14.58□□□□□ -0.08
TRA2A-201ENST00000297071 NXPH4O95158 308 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 ETDBQ3ZM63 59 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 ZFAND2AQ8N6M9 145 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 C16orf92Q96LL3 132 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 FAM19A4Q96LR4 140 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 GTSF1LQ9H1H1 148 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 RNF223E7ERA6 249 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 BRI3O95415 125 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 ASIPP42127 132 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 ATP5G2Q06055 141 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 C2orf66Q6UXQ4 117 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 DLX4Q92988 240 aaPredicted RBP14.57□□□□□ -0.08
TRA2A-201ENST00000297071 SPOCK3Q9BQ16 436 aa14.57□□□□□ -0.08
TRA2A-201ENST00000297071 FAM90A27PA6NNH2 459 aa14.56□□□□□ -0.08
TRA2A-201ENST00000297071 C19orf54Q5BKX5 351 aa14.56□□□□□ -0.08
TRA2A-201ENST00000297071 PRADC1Q9BSG0 188 aa14.56□□□□□ -0.08
TRA2A-201ENST00000297071 VCX2Q9H322 139 aa14.56□□□□□ -0.08
TRA2A-201ENST00000297071 NAV2Q8IVL1 2488 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 IGHV4OR15-8A0A075B7B6 117 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 A0A087WW49 117 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 PRR9Q5T870 116 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 CFAP126Q5VTH2 177 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 LY6HO94772 140 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 ZFP36P26651 326 aaKnown RBP14.55□□□□□ -0.08
TRA2A-201ENST00000297071 SH2D6Q7Z4S9 175 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 OR10J6PQ8NGY7 276 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 C1QTNF4Q9BXJ3 329 aa14.55□□□□□ -0.08
TRA2A-201ENST00000297071 CNOT1A5YKK6 2376 aaKnown RBP14.54□□□□□ -0.08
TRA2A-201ENST00000297071 IGHV3-66A0A0C4DH42 116 aa14.54□□□□□ -0.08
TRA2A-201ENST00000297071 PRSS29PA6NIE9 313 aa14.54□□□□□ -0.08
TRA2A-201ENST00000297071 SOCS3O14543 225 aa14.54□□□□□ -0.08
TRA2A-201ENST00000297071 UBE2D3P61077 147 aa14.54□□□□□ -0.08
TRA2A-201ENST00000297071 UBE2D2P62837 147 aa14.54□□□□□ -0.08
TRA2A-201ENST00000297071 CYSLTR1Q9Y271 337 aa14.54□□□□□ -0.08
TRA2A-201ENST00000297071 K7ENP7 123 aa14.53□□□□□ -0.08
TRA2A-201ENST00000297071 HERVK_113P61574 105 aa14.53□□□□□ -0.08
TRA2A-201ENST00000297071 SMAGPQ0VAQ4 97 aa14.53□□□□□ -0.08
TRA2A-201ENST00000297071 ZNF815PA8K554 130 aa14.52□□□□□ -0.08
TRA2A-201ENST00000297071 GRNP28799 593 aaKnown RBP14.52□□□□□ -0.08
TRA2A-201ENST00000297071 FOXI1Q12951 378 aa14.52□□□□□ -0.08
TRA2A-201ENST00000297071 C5orf56Q8N8D9 126 aa14.52□□□□□ -0.08
TRA2A-201ENST00000297071 PGPEP1Q9NXJ5 209 aa14.52□□□□□ -0.08
TRA2A-201ENST00000297071 PHLDA3Q9Y5J5 127 aa14.52□□□□□ -0.08
TRA2A-201ENST00000297071 NDUFA4O00483 81 aa14.52□□□□□ -0.09
TRA2A-201ENST00000297071 AMTNQ6UX39 209 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms