RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 OR2G3Q8NGZ4 309 aa17.13■□□□□ 0.33
U2AF1-201ENST00000291552 LOC100131303A0A0U1RQF7 123 aa17.12■□□□□ 0.33
U2AF1-201ENST00000291552 M0R2P5 195 aa17.12■□□□□ 0.33
U2AF1-201ENST00000291552 STAG3L2P0CL84 134 aa17.12■□□□□ 0.33
U2AF1-201ENST00000291552 STAG3L3P0CL85 134 aa17.12■□□□□ 0.33
U2AF1-201ENST00000291552 CDC34P49427 236 aaPredicted RBP17.12■□□□□ 0.33
U2AF1-201ENST00000291552 HSD17B11Q8NBQ5 300 aa17.12■□□□□ 0.33
U2AF1-201ENST00000291552 SGK494Q96LW2 274 aa17.12■□□□□ 0.33
U2AF1-201ENST00000291552 SUN5Q8TC36 379 aa17.11■□□□□ 0.33
U2AF1-201ENST00000291552 C11orf21Q9P2W6 132 aa17.11■□□□□ 0.33
U2AF1-201ENST00000291552 ORM1P02763 201 aa17.1■□□□□ 0.33
U2AF1-201ENST00000291552 ZNF80P51504 273 aaPredicted RBP17.1■□□□□ 0.33
U2AF1-201ENST00000291552 OR4C5Q8NGB2 326 aa17.1■□□□□ 0.33
U2AF1-201ENST00000291552 PCNPQ8WW12 178 aaKnown RBP17.1■□□□□ 0.33
U2AF1-201ENST00000291552 RAB24Q969Q5 203 aa17.1■□□□□ 0.33
U2AF1-201ENST00000291552 LY96Q9Y6Y9 160 aa17.1■□□□□ 0.33
U2AF1-201ENST00000291552 DNAH10OSP0CZ25 163 aa17.09■□□□□ 0.33
U2AF1-201ENST00000291552 ATP6V0CP27449 155 aa17.09■□□□□ 0.33
U2AF1-201ENST00000291552 AQP10Q96PS8 301 aa17.09■□□□□ 0.33
U2AF1-201ENST00000291552 SDF2L1Q9HCN8 221 aa17.09■□□□□ 0.33
U2AF1-201ENST00000291552 FAT1Q14517 4588 aa17.09■□□□□ 0.33
U2AF1-201ENST00000291552 TCRAP04437 139 aa17.08■□□□□ 0.32
U2AF1-201ENST00000291552 GCHFRP30047 84 aa17.08■□□□□ 0.32
U2AF1-201ENST00000291552 Q5BKY6 102 aa17.08■□□□□ 0.32
U2AF1-201ENST00000291552 C5orf17Q8NAS9 161 aa17.08■□□□□ 0.32
U2AF1-201ENST00000291552 PSMG3Q9BT73 122 aaPredicted RBP17.08■□□□□ 0.32
U2AF1-201ENST00000291552 C9JCJ5 164 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 IGLV2-11P01706 119 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 GATA1P15976 413 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-201ENST00000291552 ERVFC1-1P60608 527 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 ASB13Q8WXK3 278 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 SH3BGRL3Q9H299 93 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 SCRT2Q9NQ03 307 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 VPS13BQ7Z7G8 4022 aa17.07■□□□□ 0.32
U2AF1-201ENST00000291552 GGTLC3B5MD39 225 aa17.06■□□□□ 0.32
U2AF1-201ENST00000291552 DPPA3Q6W0C5 159 aa17.06■□□□□ 0.32
U2AF1-201ENST00000291552 NFE4Q86UQ8 179 aa17.06■□□□□ 0.32
U2AF1-201ENST00000291552 KCNS1Q96KK3 526 aa17.06■□□□□ 0.32
U2AF1-201ENST00000291552 TXNDC17Q9BRA2 123 aa17.06■□□□□ 0.32
U2AF1-201ENST00000291552 SERTM2A0A1B0GWG4 89 aa17.05■□□□□ 0.32
U2AF1-201ENST00000291552 TMEM75Q8N9X5 138 aa17.05■□□□□ 0.32
U2AF1-201ENST00000291552 MSRB1Q9NZV6 116 aa17.05■□□□□ 0.32
U2AF1-201ENST00000291552 A0A087WTM6 91 aa17.04■□□□□ 0.32
U2AF1-201ENST00000291552 PTTG1O95997 202 aa17.04■□□□□ 0.32
U2AF1-201ENST00000291552 PSG8Q9UQ74 426 aa17.04■□□□□ 0.32
U2AF1-201ENST00000291552 NDFIP1Q9BT67 221 aa17.03■□□□□ 0.32
U2AF1-201ENST00000291552 MED28Q9H204 178 aa17.03■□□□□ 0.32
U2AF1-201ENST00000291552 PGPEP1Q9NXJ5 209 aa17.03■□□□□ 0.32
U2AF1-201ENST00000291552 TRAV9-2A0A087WT02 112 aa17.02■□□□□ 0.32
U2AF1-201ENST00000291552 GCGP01275 180 aa17.02■□□□□ 0.32
U2AF1-201ENST00000291552 TIRAPP58753 221 aa17.02■□□□□ 0.32
U2AF1-201ENST00000291552 C9orf85Q96MD7 179 aa17.02■□□□□ 0.32
U2AF1-201ENST00000291552 FBLL1A6NHQ2 334 aaKnown RBP17.01■□□□□ 0.31
U2AF1-201ENST00000291552 K7EP13 123 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 RS1O15537 224 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 EVI2AP22794 236 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 SUMO1P63165 101 aaKnown RBP17.01■□□□□ 0.31
U2AF1-201ENST00000291552 SERF2P84101 59 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 ZNF876PQ49A33 203 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 LCE2DQ5TA82 110 aaPredicted RBP17.01■□□□□ 0.31
U2AF1-201ENST00000291552 CFAP126Q5VTH2 177 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 CDPF1Q6NVV7 123 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 SLC25A29Q8N8R3 303 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 NHLRC2Q8NBF2 726 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 BATF3Q9NR55 127 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 EPDR1Q9UM22 224 aa17.01■□□□□ 0.31
U2AF1-201ENST00000291552 DNAH8Q96JB1 4490 aa17■□□□□ 0.31
U2AF1-201ENST00000291552 RNF222A6NCQ9 220 aa17■□□□□ 0.31
U2AF1-201ENST00000291552 EREGO14944 169 aa17■□□□□ 0.31
U2AF1-201ENST00000291552 CRYGDP07320 174 aa17■□□□□ 0.31
U2AF1-201ENST00000291552 PFN1P07737 140 aaKnown RBP17■□□□□ 0.31
U2AF1-201ENST00000291552 FLI1Q01543 452 aaPredicted RBP17■□□□□ 0.31
U2AF1-201ENST00000291552 CXorf1O96002 111 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 MBP02144 154 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 ZNF726P1Q15940 193 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 RPL7L1Q6DKI1 246 aaKnown RBP16.99■□□□□ 0.31
U2AF1-201ENST00000291552 PRNTQ86SH4 94 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 CYB561D1Q8N8Q1 229 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 TMEM167BQ9NRX6 74 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 TNFSF18Q9UNG2 199 aa16.99■□□□□ 0.31
U2AF1-201ENST00000291552 PGPEP1LA6NFU8 196 aa16.98■□□□□ 0.31
U2AF1-201ENST00000291552 TAAR5O14804 337 aa16.98■□□□□ 0.31
U2AF1-201ENST00000291552 GIPP09681 153 aaPredicted RBP16.98■□□□□ 0.31
U2AF1-201ENST00000291552 RNASE3P12724 160 aaKnown RBP16.98■□□□□ 0.31
U2AF1-201ENST00000291552 KRTAP10-1P60331 282 aa16.98■□□□□ 0.31
U2AF1-201ENST00000291552 ZNF506Q5JVG8 444 aa16.98■□□□□ 0.31
U2AF1-201ENST00000291552 SH2D6Q7Z4S9 175 aa16.98■□□□□ 0.31
U2AF1-201ENST00000291552 ACTR3CQ9C0K3 210 aaPredicted RBP16.98■□□□□ 0.31
U2AF1-201ENST00000291552 IGHV3-73A0A0B4J1V6 119 aa16.97■□□□□ 0.31
U2AF1-201ENST00000291552 K7EQM0 130 aa16.97■□□□□ 0.31
U2AF1-201ENST00000291552 XGP55808 180 aa16.97■□□□□ 0.31
U2AF1-201ENST00000291552 SMUG1Q53HV7 270 aa16.97■□□□□ 0.31
U2AF1-201ENST00000291552 LINC00479Q96M42 142 aa16.97■□□□□ 0.31
U2AF1-201ENST00000291552 PPT1P50897 306 aa16.96■□□□□ 0.31
U2AF1-201ENST00000291552 C10orf126Q8N4M7 172 aa16.96■□□□□ 0.31
U2AF1-201ENST00000291552 IGHV3-38A0A0C4DH36 116 aa16.95■□□□□ 0.3
U2AF1-201ENST00000291552 LINC01556Q5JQF7 62 aa16.95■□□□□ 0.3
U2AF1-201ENST00000291552 PTH2Q96A98 100 aa16.95■□□□□ 0.3
U2AF1-201ENST00000291552 TRAV34A0A0B4J273 112 aa16.94■□□□□ 0.3
U2AF1-201ENST00000291552 TRBV6-4A0A1B0GX49 114 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms