RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ANXA2RQ3ZCQ2 193 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE13Q4V321 117 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 GPHB5Q86YW7 130 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 RARRES2Q99969 163 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 TXNDC17Q9BRA2 123 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 HSPB8Q9UJY1 196 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 J3QR89 54 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 SNAI2O43623 268 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 CKS1BP61024 79 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 PARLQ9H300 379 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 A8MWP6 167 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 COX6CP09669 75 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 ADMP35318 185 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 FHL3Q13643 280 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 HIVEP1P15822 2718 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.37
PTPDC1-201ENST00000288976 K7EMT4 169 aa6.46□□□□□ -1.37
PTPDC1-201ENST00000288976 INSP01308 110 aa6.46□□□□□ -1.37
PTPDC1-201ENST00000288976 MRPL27Q9P0M9 148 aaKnown RBP6.46□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 A0A1B0GUT8 65 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 PGPEP1LA6NFU8 196 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 TMEM250H0YL14 139 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 SCGB1A1P11684 91 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 JPT2Q9H910 190 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 FAM74A7A6NL05 159 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 NDUFS6O75380 124 aaKnown RBP6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 GZMBP10144 247 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 CBLN1P23435 193 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 C10orf99Q6UWK7 81 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 LYPD6BQ8NI32 183 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 MCRIP2Q9BUT9 160 aaKnown RBP6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 PSG8Q9UQ74 426 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 LINC00158P58513 81 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 FAM74A3Q4VXF1 159 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 MBD3L1Q8WWY6 194 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 IGF2BP2-AS1Q96M15 143 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 PRELID3AQ96N28 172 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 CITED1Q99966 193 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
PTPDC1-201ENST00000288976 H3BRN7 92 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 NMBP08949 121 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 CD28P10747 220 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 ZNF25P17030 456 aaPredicted RBP6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 CST9LQ9H4G1 147 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 NSD1Q96L73 2696 aaPredicted RBP6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 TRGV11A0A075B6L2 103 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 TMEM218A2RU14 115 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 GP9P14770 177 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 LEPP41159 167 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 IQCJQ1A5X6 159 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 OR11H2Q8NH07 326 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 HIST1H2BAQ96A08 127 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 ZNF747Q9BV97 191 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 TMEM14CQ9P0S9 112 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 CUBNO60494 3623 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 IFI27P40305 119 aaPredicted RBP6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 C1orf194Q5T5A4 169 aa6.45□□□□□ -1.38
PTPDC1-201ENST00000288976 APOC4P55056 127 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 PSG3Q16557 428 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 SHANK2-AS3Q9BTD1 123 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 U3KQE9 123 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 MXRA5Q9NR99 2828 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 MYCNOSP40205 109 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 KLF5Q13887 457 aaPredicted RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 COX19Q49B96 90 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 PRIMA1Q86XR5 153 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 RPP25LQ8N5L8 163 aaKnown RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 RNF182Q8N6D2 247 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 C14orf178Q8N769 122 aaPredicted RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 DLX4Q92988 240 aaPredicted RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 ZNF625Q96I27 306 aaPredicted RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 SSBP4Q9BWG4 385 aaPredicted RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 RNASE7Q9H1E1 156 aaKnown RBP6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 PLA2G2EQ9NZK7 142 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 NRN1Q9NPD7 142 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 ZFP30Q9Y2G7 519 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 CELSR1Q9NYQ6 3014 aa6.44□□□□□ -1.38
PTPDC1-201ENST00000288976 APOMO95445 188 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 CD5P06127 495 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 SLURP1P55000 103 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 KRTAP10-3P60369 221 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 NPC2P61916 151 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 KRTAP24-1Q3LI83 254 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 ST20Q9HBF5 79 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 IGHV4OR15-8A0A075B7B6 117 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 A0A087WW49 117 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 APRG1Q8IVJ8 170 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms