RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ARPC1AQ92747 370 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
SKA1-201ENST00000285116 PRTN3P24158 256 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 PRB3Q04118 309 aaPredicted RBP8.05□□□□□ -1.12
SKA1-201ENST00000285116 C12orf74Q32Q52 190 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 ZNF672Q499Z4 452 aaPredicted RBP8.05□□□□□ -1.12
SKA1-201ENST00000285116 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 ZNF575Q86XF7 245 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
SKA1-201ENST00000285116 M0R3E3 92 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 LY6HO94772 140 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 DLX1P56177 255 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 ZC2HC1BQ5TFG8 222 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
SKA1-201ENST00000285116 NF1P21359 2839 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 IGHG4P01861 327 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 MINOS1Q5TGZ0 78 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 FOXC2Q99958 501 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 ONECUT1Q9UBC0 465 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 MINOS1-NBL1R4GNA1 71 aa8.04□□□□□ -1.12
SKA1-201ENST00000285116 RRN3P1Q2M238 152 aa8.03□□□□□ -1.12
SKA1-201ENST00000285116 TRAV26-1A0A087WT03 109 aa8.03□□□□□ -1.12
SKA1-201ENST00000285116 TMEM8BA6NDV4 472 aa8.03□□□□□ -1.12
SKA1-201ENST00000285116 EGR2P11161 476 aaPredicted RBP8.03□□□□□ -1.12
SKA1-201ENST00000285116 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
SKA1-201ENST00000285116 MRPL16Q9NX20 251 aaKnown RBP8.03□□□□□ -1.12
SKA1-201ENST00000285116 SMAD5-AS1Q9Y6J3 95 aa8.03□□□□□ -1.12
SKA1-201ENST00000285116 AMTNQ6UX39 209 aa8.02□□□□□ -1.12
SKA1-201ENST00000285116 MRPL53Q96EL3 112 aaKnown RBP8.02□□□□□ -1.12
SKA1-201ENST00000285116 ANKRD17O75179 2603 aaKnown RBP8.02□□□□□ -1.13
SKA1-201ENST00000285116 CCL21O00585 134 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 TNFRSF6BO95407 300 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 CTSGP08311 255 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
SKA1-201ENST00000285116 GNLYP22749 145 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 WFDC12Q8WWY7 111 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 TIMD4Q96H15 378 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
SKA1-201ENST00000285116 LYNX1G3V0Z9 82 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 LYNX1P0DP58 116 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 CRYBA4P53673 196 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 HIST1H4GQ99525 98 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 TEX15Q9BXT5 2789 aa8.02□□□□□ -1.13
SKA1-201ENST00000285116 IGKV2-40A0A087WW87 121 aaPredicted RBP8.01□□□□□ -1.13
SKA1-201ENST00000285116 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 K7EMI3 77 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 IGKV2D-40P01614 121 aaPredicted RBP8.01□□□□□ -1.13
SKA1-201ENST00000285116 ATP5G2Q06055 141 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 MAPKAPK5-AS1Q8N8E1 139 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 ATP6V0E2Q8NHE4 81 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 TMEM158Q8WZ71 300 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 TMEM160Q9NX00 188 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 FABP5P3A8MUU1 101 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 LINC01619G3V211 115 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 APOMO95445 188 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 INSL3P51460 131 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 ZNF80P51504 273 aaPredicted RBP8.01□□□□□ -1.13
SKA1-201ENST00000285116 NDPQ00604 133 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 C11orf71Q6IPW1 123 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 HIF1ANQ9NWT6 349 aa8.01□□□□□ -1.13
SKA1-201ENST00000285116 TRAV40A0A0B4J280 105 aa8□□□□□ -1.13
SKA1-201ENST00000285116 Q8N8P6 123 aa8□□□□□ -1.13
SKA1-201ENST00000285116 FAM110DQ8TAY7 271 aaPredicted RBP8□□□□□ -1.13
SKA1-201ENST00000285116 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
SKA1-201ENST00000285116 NRGNQ92686 78 aa8□□□□□ -1.13
SKA1-201ENST00000285116 SLC50A1Q9BRV3 221 aa8□□□□□ -1.13
SKA1-201ENST00000285116 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
SKA1-201ENST00000285116 APCP25054 2843 aa8□□□□□ -1.13
SKA1-201ENST00000285116 FOXI1Q12951 378 aa8□□□□□ -1.13
SKA1-201ENST00000285116 KLRD1Q13241 179 aa8□□□□□ -1.13
SKA1-201ENST00000285116 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
SKA1-201ENST00000285116 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
SKA1-201ENST00000285116 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 IGHV4-4A0A075B6R2 117 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 NCBP2LA6PVI3 153 aaKnown RBP7.99□□□□□ -1.13
SKA1-201ENST00000285116 MYOZ3Q8TDC0 251 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 C1QTNF4Q9BXJ3 329 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 ZFAND3Q9H8U3 227 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 PRRC2AP48634 2157 aaKnown RBP7.99□□□□□ -1.13
SKA1-201ENST00000285116 IL17RELQ6ZVW7 336 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 VMO1Q7Z5L0 202 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 MSRB1Q9NZV6 116 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 GAS8-AS1O95177 125 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 PLNP26678 52 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 LCNL1Q6ZST4 164 aa7.99□□□□□ -1.13
SKA1-201ENST00000285116 IGLV2-18A0A075B6J9 118 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 A0A087WX48 190 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 IGHV7-81A0A0B4J1V7 117 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 SYT8Q8NBV8 401 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 ITPR3Q14573 2671 aa7.98□□□□□ -1.13
SKA1-201ENST00000285116 HOXA3O43365 443 aaPredicted RBP7.97□□□□□ -1.13
SKA1-201ENST00000285116 BUB3O43684 328 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 ORM1P02763 201 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 Q8N9W7 124 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms