RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 PRR20EP86478 221 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 PRR20CP86479 221 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 PRR20DP86480 221 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 PRR20BP86481 221 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 PRR20AP86496 221 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 FGF23Q9GZV9 251 aaPredicted RBP9.03□□□□□ -0.96
USP53-201ENST00000274030 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 KAAG1Q9UBP8 84 aa9.03□□□□□ -0.96
USP53-201ENST00000274030 IGHV4-61A0A0C4DH41 118 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.97
USP53-201ENST00000274030 CFHR4Q92496 578 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 RITA1Q96K30 269 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 IGHV2-70P01814 119 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.97
USP53-201ENST00000274030 ELANEP08246 267 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 XCL1P47992 114 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 BLCAPP62952 87 aa9.02□□□□□ -0.97
USP53-201ENST00000274030 H3BMM0 161 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 HAMPP81172 84 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 UBE2WQ96B02 151 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.01□□□□□ -0.97
USP53-201ENST00000274030 IGKV2-29A2NJV5 120 aaPredicted RBP9.01□□□□□ -0.97
USP53-201ENST00000274030 SOCS3O14543 225 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 Q6ZQT7 251 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 U3KQE9 123 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 PLXNA4Q9HCM2 1894 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 SLURP1P55000 103 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 MRPL53Q96EL3 112 aaKnown RBP9.01□□□□□ -0.97
USP53-201ENST00000274030 MYO18BQ8IUG5 2567 aa9.01□□□□□ -0.97
USP53-201ENST00000274030 KIAA1671Q9BY89 1806 aa9□□□□□ -0.97
USP53-201ENST00000274030 IGHV4-30-2A0A087WSY4 118 aa9□□□□□ -0.97
USP53-201ENST00000274030 F8VRH5 84 aa9□□□□□ -0.97
USP53-201ENST00000274030 VPREB3Q9UKI3 123 aa9□□□□□ -0.97
USP53-201ENST00000274030 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
USP53-201ENST00000274030 Q9HAA7 133 aa9□□□□□ -0.97
USP53-201ENST00000274030 FRMPD3Q5JV73 1810 aa9□□□□□ -0.97
USP53-201ENST00000274030 NBL1P41271 181 aa9□□□□□ -0.97
USP53-201ENST00000274030 J3QQQ9 107 aa9□□□□□ -0.97
USP53-201ENST00000274030 CCL24O00175 119 aa9□□□□□ -0.97
USP53-201ENST00000274030 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
USP53-201ENST00000274030 LGALS9CQ6DKI2 356 aa9□□□□□ -0.97
USP53-201ENST00000274030 SLX1AQ9BQ83 275 aa9□□□□□ -0.97
USP53-201ENST00000274030 CHD3Q12873 2000 aaKnown RBP9□□□□□ -0.97
USP53-201ENST00000274030 COX8AP10176 69 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 AMTNQ6UX39 209 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 OTOGLQ3ZCN5 2332 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 LTAP01374 205 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 C11orf52Q96A22 123 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 C9orf118A6NHY6 69 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 CRLF1O75462 422 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 POU2AF1Q16633 256 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 IGKV2D-24A0A075B6R9 120 aa8.99□□□□□ -0.97
USP53-201ENST00000274030 RS1O15537 224 aa8.98□□□□□ -0.97
USP53-201ENST00000274030 H3BMG7 143 aa8.98□□□□□ -0.97
USP53-201ENST00000274030 BVES-AS1Q5T3Y7 98 aa8.98□□□□□ -0.97
USP53-201ENST00000274030 DKK4Q9UBT3 224 aa8.98□□□□□ -0.97
USP53-201ENST00000274030 NPSP0C0P6 89 aa8.98□□□□□ -0.97
USP53-201ENST00000274030 PRO1854Q9UHT4 67 aa8.98□□□□□ -0.97
USP53-201ENST00000274030 TSSC4Q9Y5U2 329 aaPredicted RBP8.98□□□□□ -0.97
USP53-201ENST00000274030 IL15RAQ13261 267 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 MGAMO43451 1857 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 NLRC5Q86WI3 1866 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 ANAPC1Q9H1A4 1944 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 IGHV7-81A0A0B4J1V7 117 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 CRYGCP07315 174 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 TAL2Q16559 108 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 C5orf38Q86SI9 138 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 AJUBAQ96IF1 538 aa8.97□□□□□ -0.97
USP53-201ENST00000274030 CEND1Q8N111 149 aa8.96□□□□□ -0.97
USP53-201ENST00000274030 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.97
USP53-201ENST00000274030 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.97
USP53-201ENST00000274030 HERVK_113P63121 156 aa8.96□□□□□ -0.97
USP53-201ENST00000274030 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.97
USP53-201ENST00000274030 KLF2Q9Y5W3 355 aaPredicted RBP8.96□□□□□ -0.97
USP53-201ENST00000274030 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 C10orf91Q5T1B1 145 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 PYGO2Q9BRQ0 406 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 LHBP01229 141 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 RBMY1FQ15415 496 aaKnown RBP8.96□□□□□ -0.98
USP53-201ENST00000274030 Q6ZVH6 145 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 C20orf78Q9BR46 151 aa8.96□□□□□ -0.98
USP53-201ENST00000274030 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
USP53-201ENST00000274030 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 WIPF2Q8TF74 440 aaPredicted RBP8.95□□□□□ -0.98
USP53-201ENST00000274030 RHOHQ15669 191 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 PCP2Q8IVA1 136 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 OR11H6Q8NGC7 330 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 WISP2O76076 250 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 TSC2P49815 1807 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 SORL1Q92673 2214 aa8.95□□□□□ -0.98
USP53-201ENST00000274030 K7EIM0 57 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms