RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
PRDM16-201ENST00000270722 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
PRDM16-201ENST00000270722 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
PRDM16-201ENST00000270722 IGHV3-73A0A0B4J1V6 119 aa10.72□□□□□ -0.69
PRDM16-201ENST00000270722 BRD3OSQ6XYD6 125 aa10.72□□□□□ -0.69
PRDM16-201ENST00000270722 NDUFA4O00483 81 aa10.72□□□□□ -0.69
PRDM16-201ENST00000270722 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
PRDM16-201ENST00000270722 PAQR4Q8N4S7 273 aaPredicted RBP10.71□□□□□ -0.69
PRDM16-201ENST00000270722 OVOL3O00110 214 aa10.71□□□□□ -0.69
PRDM16-201ENST00000270722 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
PRDM16-201ENST00000270722 CFHR2P36980 270 aa10.71□□□□□ -0.7
PRDM16-201ENST00000270722 MLST8Q9BVC4 326 aa10.71□□□□□ -0.7
PRDM16-201ENST00000270722 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.7
PRDM16-201ENST00000270722 ALPK3Q96L96 1907 aa10.71□□□□□ -0.7
PRDM16-201ENST00000270722 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.7
PRDM16-201ENST00000270722 LYNX1P0DP58 116 aa10.71□□□□□ -0.7
PRDM16-201ENST00000270722 BAALC-AS2P0C853 105 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 NTN5Q8WTR8 489 aaPredicted RBP10.7□□□□□ -0.7
PRDM16-201ENST00000270722 TRAV12-2A0A075B6T6 113 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 PPIFP30405 207 aaKnown RBP10.7□□□□□ -0.7
PRDM16-201ENST00000270722 C9orf66Q5T8R8 295 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 Q96MF0 132 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 LYZL1Q6UWQ5 148 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 TMEM75Q8N9X5 138 aa10.7□□□□□ -0.7
PRDM16-201ENST00000270722 BRWD3Q6RI45 1802 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 CR1LQ2VPA4 569 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 CLUHP3Q96NS8 147 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 JMJD7-PLA2G4BH0Y9G9 81 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 NDUFS5O43920 106 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 WDR90Q96KV7 1748 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 ZNF474Q6S9Z5 364 aaPredicted RBP10.69□□□□□ -0.7
PRDM16-201ENST00000270722 SHANK2-AS3Q9BTD1 123 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 SH2D1AO60880 128 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 IL15RAQ13261 267 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 TEX36Q5VZQ5 186 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 ZFP2Q6ZN57 461 aa10.69□□□□□ -0.7
PRDM16-201ENST00000270722 H3BT86 120 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 SMIM26A0A096LP01 95 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 C4orf51C9J302 202 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 TIMM17BO60830 172 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 CLPSP04118 112 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 PRO0628Q9UI54 55 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 ANGP03950 147 aaKnown RBP10.68□□□□□ -0.7
PRDM16-201ENST00000270722 IGFL3Q6UXB1 125 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 XCL2Q9UBD3 114 aa10.68□□□□□ -0.7
PRDM16-201ENST00000270722 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 FOXF2Q12947 444 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 IGLL1P15814 213 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 K7ERJ3 54 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 Q6ZS49 121 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
PRDM16-201ENST00000270722 C16orf54Q6UWD8 224 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 ADAMTSL1Q8N6G6 1762 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 MDS2Q8NDY4 140 aa10.67□□□□□ -0.7
PRDM16-201ENST00000270722 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 LINC01620Q4KN68 170 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 C14orf177Q52M58 125 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 SCRT2Q9NQ03 307 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 DEPPQ9NTK1 212 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 IGKV1D-13A0A0B4J2D9 117 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 H0YGX0 51 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 IGKV1-13P0DP09 117 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 NDPQ00604 133 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 SERP1Q9Y6X1 66 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 C5orf63A6NC05 138 aa10.66□□□□□ -0.7
PRDM16-201ENST00000270722 F8VRH5 84 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 GGNQ86UU5 652 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 KIR2DL5BQ8NHK3 375 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 TECTAO75443 2155 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 ZNF493Q6ZR52 646 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 CFC1P0CG37 223 aa10.65□□□□□ -0.7
PRDM16-201ENST00000270722 COL11A2P13942 1736 aaPredicted RBP10.65□□□□□ -0.7
PRDM16-201ENST00000270722 ZNF837Q96EG3 531 aaPredicted RBP10.65□□□□□ -0.71
PRDM16-201ENST00000270722 HIGD1BQ9P298 99 aa10.65□□□□□ -0.71
PRDM16-201ENST00000270722 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 C2orf16Q68DN1 1984 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 TMEM14EPQ6UXP3 125 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 ETDCA0A1B0GVM5 59 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 IGKV2D-24A0A075B6R9 120 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 CSDC2Q9Y534 153 aaKnown RBP10.64□□□□□ -0.71
PRDM16-201ENST00000270722 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
PRDM16-201ENST00000270722 RS1O15537 224 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 Q8TCH9 128 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 NOTCH4Q99466 2003 aa10.64□□□□□ -0.71
PRDM16-201ENST00000270722 GAFA1Q96PS6 74 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 SPART-AS1P0CW21 52 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 PRORYQ9H606 182 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 C9JQL5 133 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 A0A087WWL8 130 aa10.63□□□□□ -0.71
PRDM16-201ENST00000270722 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms