RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
PDLIM2-201ENST00000265810 ZNF702PQ9H963 129 aa11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 CD300EQ496F6 205 aaPredicted RBP11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 SPATA45Q537H7 98 aa11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 MCRIP2Q9BUT9 160 aaKnown RBP11.08□□□□□ -0.64
PDLIM2-201ENST00000265810 A8MWP6 167 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 TMEM61Q8N0U2 210 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 ATP5LO75964 103 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 AMBPP02760 352 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 HIST3H2BBQ8N257 126 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 LOC102724200A0A096LPH7 203 aaPredicted RBP11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 PKIAP61925 76 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 C1orf159Q96HA4 380 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 TMEM160Q9NX00 188 aa11.07□□□□□ -0.64
PDLIM2-201ENST00000265810 HBDP02042 147 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 DEFB130BP0DP73 79 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 DEFB130AP0DP74 79 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 UBE2CO00762 179 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 GNRH2O43555 120 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 PSMB8P28062 276 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 TYMSP04818 313 aa11.06□□□□□ -0.64
PDLIM2-201ENST00000265810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 SPRY2O43597 315 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 MYCNOSP40205 109 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 SLAQ13239 276 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 PCP4P48539 62 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 FAM104BQ5XKR9 115 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
PDLIM2-201ENST00000265810 A0A087X0K7 114 aa11.04□□□□□ -0.64
PDLIM2-201ENST00000265810 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
PDLIM2-201ENST00000265810 WIPF2Q8TF74 440 aaPredicted RBP11.04□□□□□ -0.64
PDLIM2-201ENST00000265810 COTL1Q14019 142 aa11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 C19orf54Q5BKX5 351 aa11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 LINC01006Q8NI28 216 aa11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 GEMIN7Q9H840 131 aaKnown RBP11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 CFHR3Q02985 330 aa11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 OR2K2Q8NGT1 345 aa11.03□□□□□ -0.64
PDLIM2-201ENST00000265810 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
PDLIM2-201ENST00000265810 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.64
PDLIM2-201ENST00000265810 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.64
PDLIM2-201ENST00000265810 C9orf66Q5T8R8 295 aa11.02□□□□□ -0.64
PDLIM2-201ENST00000265810 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
PDLIM2-201ENST00000265810 IGLV1-40P01703 118 aa11.02□□□□□ -0.65
PDLIM2-201ENST00000265810 RNASE1P07998 156 aaKnown RBP11.02□□□□□ -0.65
PDLIM2-201ENST00000265810 HILS1P60008 231 aa11.02□□□□□ -0.65
PDLIM2-201ENST00000265810 CSTL1Q9H114 145 aa11.02□□□□□ -0.65
PDLIM2-201ENST00000265810 NACAE9PAV3 2078 aa11.02□□□□□ -0.65
PDLIM2-201ENST00000265810 LAGE3Q14657 143 aa11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 C18orf32Q8TCD1 76 aa11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 IGHV3-16A0A0C4DH30 117 aa11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 MRPL51Q4U2R6 128 aaKnown RBP11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 TRAV26-2A0A0B4J265 109 aa11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
PDLIM2-201ENST00000265810 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
PDLIM2-201ENST00000265810 IFI27L1Q96BM0 104 aa11□□□□□ -0.65
PDLIM2-201ENST00000265810 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
PDLIM2-201ENST00000265810 VCYO14598 125 aa11□□□□□ -0.65
PDLIM2-201ENST00000265810 MRGPRG-AS1Q2M3A8 158 aa11□□□□□ -0.65
PDLIM2-201ENST00000265810 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 VCX2Q9H322 139 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 GAGE7O76087 117 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 DDTP30046 118 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 M0R143 59 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 LGALS9O00182 355 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 AZU1P20160 251 aa10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
PDLIM2-201ENST00000265810 TRAV8-6A0A0B4J262 113 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 Q0VG73 95 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 Q1RN00 199 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 SLC25A34Q6PIV7 304 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 ALKBH7Q9BT30 221 aaPredicted RBP10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 TRAV25A0A0B4J276 109 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 SUMO2P61956 95 aaKnown RBP10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 UQCR10Q9UDW1 63 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 APOC4P55056 127 aa10.98□□□□□ -0.65
PDLIM2-201ENST00000265810 CHCHD5Q9BSY4 110 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms