RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 U3KQK5 164 aa12.76□□□□□ -0.37
CHKA-201ENST00000265689 SMKR1H3BMG3 65 aa12.75□□□□□ -0.37
CHKA-201ENST00000265689 BTF3P20290 206 aaKnown RBP12.75□□□□□ -0.37
CHKA-201ENST00000265689 KRTAP1-1Q07627 177 aa12.75□□□□□ -0.37
CHKA-201ENST00000265689 MAJINQ3KP22 176 aa12.75□□□□□ -0.37
CHKA-201ENST00000265689 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
CHKA-201ENST00000265689 PRELID3AQ96N28 172 aa12.75□□□□□ -0.37
CHKA-201ENST00000265689 WFDC3Q8IUB2 231 aa12.75□□□□□ -0.37
CHKA-201ENST00000265689 HIVEP2P31629 2446 aa12.74□□□□□ -0.37
CHKA-201ENST00000265689 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
CHKA-201ENST00000265689 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
CHKA-201ENST00000265689 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
CHKA-201ENST00000265689 PRSS3P2Q8NHM4 247 aa12.74□□□□□ -0.37
CHKA-201ENST00000265689 UFC1Q9Y3C8 167 aa12.74□□□□□ -0.37
CHKA-201ENST00000265689 DLEU1O43261 78 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
CHKA-201ENST00000265689 TMEM191AQ9H0A3 160 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
CHKA-201ENST00000265689 BAHCC1Q9P281 2608 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 LEPROTL1O95214 131 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 NCR2O95944 276 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 OR8A1Q8NGG7 326 aa12.73□□□□□ -0.37
CHKA-201ENST00000265689 TIMM8BQ9Y5J9 83 aaPredicted RBP12.73□□□□□ -0.37
CHKA-201ENST00000265689 TEP1Q99973 2627 aaKnown RBP12.73□□□□□ -0.37
CHKA-201ENST00000265689 ELANEP08246 267 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 FA2HQ7L5A8 372 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
CHKA-201ENST00000265689 IGHV4OR15-8A0A075B7B6 117 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 A0A087WW49 117 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 LGALS1P09382 135 aaKnown RBP12.72□□□□□ -0.37
CHKA-201ENST00000265689 CKS2P33552 79 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 MYOZ3Q8TDC0 251 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 TMEM70Q9BUB7 260 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
CHKA-201ENST00000265689 SYNJ2BPP57105 145 aa12.71□□□□□ -0.37
CHKA-201ENST00000265689 KIR3DS1Q14943 382 aa12.71□□□□□ -0.37
CHKA-201ENST00000265689 MRPL52Q86TS9 123 aaKnown RBP12.71□□□□□ -0.37
CHKA-201ENST00000265689 DCANP1Q8TF63 244 aa12.71□□□□□ -0.37
CHKA-201ENST00000265689 GOLT1BQ9Y3E0 138 aa12.71□□□□□ -0.37
CHKA-201ENST00000265689 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
CHKA-201ENST00000265689 NPYP01303 97 aa12.71□□□□□ -0.37
CHKA-201ENST00000265689 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
CHKA-201ENST00000265689 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
CHKA-201ENST00000265689 Q6ZN92 141 aa12.7□□□□□ -0.38
CHKA-201ENST00000265689 FAM19A4Q96LR4 140 aa12.7□□□□□ -0.38
CHKA-201ENST00000265689 WNK1Q9H4A3 2382 aa12.7□□□□□ -0.38
CHKA-201ENST00000265689 OR5AL1P0C617 328 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 RNASE4P34096 147 aaKnown RBP12.69□□□□□ -0.38
CHKA-201ENST00000265689 UBE2E2Q96LR5 201 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 H3BVH4 76 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
CHKA-201ENST00000265689 EVI2AP22794 236 aa12.68□□□□□ -0.38
CHKA-201ENST00000265689 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
CHKA-201ENST00000265689 ID1P41134 155 aa12.68□□□□□ -0.38
CHKA-201ENST00000265689 STPG4Q8N801 248 aa12.68□□□□□ -0.38
CHKA-201ENST00000265689 UQCR10Q9UDW1 63 aa12.68□□□□□ -0.38
CHKA-201ENST00000265689 TRAV21A0A0B4J279 112 aa12.68□□□□□ -0.38
CHKA-201ENST00000265689 SPRY2O43597 315 aa12.68□□□□□ -0.38
CHKA-201ENST00000265689 Q8N2B8 174 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 RNF152Q8N8N0 203 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 WFDC12Q8WWY7 111 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 FOXC2Q99958 501 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 MCRIP2Q9BUT9 160 aaKnown RBP12.67□□□□□ -0.38
CHKA-201ENST00000265689 JMJD1CQ15652 2540 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 CRXO43186 299 aaPredicted RBP12.67□□□□□ -0.38
CHKA-201ENST00000265689 SNAI2O43623 268 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 HNRNPA3P51991 378 aaKnown RBP12.67□□□□□ -0.38
CHKA-201ENST00000265689 FXYD7P58549 80 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 COL5A1-AS1Q5SY13 56 aa12.67□□□□□ -0.38
CHKA-201ENST00000265689 A0A096LNJ9 63 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 H0Y8G0 127 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 GATA1P15976 413 aaPredicted RBP12.66□□□□□ -0.38
CHKA-201ENST00000265689 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 SPANXN1Q5VSR9 72 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 HSPB8Q9UJY1 196 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
CHKA-201ENST00000265689 LGALS9O00182 355 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 GAGE1Q13065 139 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 LAMTOR2Q9Y2Q5 125 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 TCF21O43680 179 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 ZNF747Q9BV97 191 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 TENM1Q9UKZ4 2725 aa12.65□□□□□ -0.38
CHKA-201ENST00000265689 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
CHKA-201ENST00000265689 OR4C46A6NHA9 309 aa12.64□□□□□ -0.39
CHKA-201ENST00000265689 PPBPP02775 128 aa12.64□□□□□ -0.39
CHKA-201ENST00000265689 Q6ZVH6 145 aa12.64□□□□□ -0.39
CHKA-201ENST00000265689 TP73-AS1Q9UF72 201 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms