RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MORN5Q5VZ52 161 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 ODF3L1Q8IXM7 274 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 KIR2DL5AQ8N109 375 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 I3L3M4 83 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 GP9P14770 177 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 AZU1P20160 251 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 PRIMA1Q86XR5 153 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 CST9LQ9H4G1 147 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 GHRHP01286 108 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 HIVEP2P31629 2446 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 PCNX3Q9H6A9 2034 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 PIEZO2Q9H5I5 2752 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 WNK1Q9H4A3 2382 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 CTSGP08311 255 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 S100A7L2Q5SY68 101 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 Q8N9W7 124 aa10.96□□□□□ -0.66
CDH3-201ENST00000264012 NRGNQ92686 78 aa10.95□□□□□ -0.66
CDH3-201ENST00000264012 SMIM2Q9BVW6 85 aa10.95□□□□□ -0.66
CDH3-201ENST00000264012 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
CDH3-201ENST00000264012 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
CDH3-201ENST00000264012 Q8N7P7 452 aa10.95□□□□□ -0.66
CDH3-201ENST00000264012 IGLV2-23P01705 113 aa10.95□□□□□ -0.66
CDH3-201ENST00000264012 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
CDH3-201ENST00000264012 TMEM141Q96I45 108 aa10.95□□□□□ -0.66
CDH3-201ENST00000264012 LGALS1P09382 135 aaKnown RBP10.95□□□□□ -0.66
CDH3-201ENST00000264012 CCDC168Q8NDH2 2452 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 WDR87Q6ZQQ6 2873 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 GAGE7O76087 117 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 GAGE12FP0CL80 117 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 GAGE12GP0CL81 117 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 GAGE12IP0CL82 117 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 CDPF1Q6NVV7 123 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
CDH3-201ENST00000264012 PSCAO43653 123 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 FOXE3Q13461 319 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 PMVKQ15126 192 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 JPT2Q9H910 190 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
CDH3-201ENST00000264012 SS18Q15532 418 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 ZNRF2Q8NHG8 242 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 NCKAP5O14513 1909 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 FOXI2Q6ZQN5 318 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 RBAKDNA6NC62 111 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 IGLL1P15814 213 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 NAV2Q8IVL1 2488 aa10.93□□□□□ -0.66
CDH3-201ENST00000264012 TEX22C9J3V5 150 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 E7EUB6 86 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 DAD1P61803 113 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 AJUBAQ96IF1 538 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 F5H768 121 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 CFHR4Q92496 578 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 IGHV3-38A0A0C4DH36 116 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 C5orf56Q8N8D9 126 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 FAM167A-AS1Q96KT0 104 aa10.92□□□□□ -0.66
CDH3-201ENST00000264012 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 GNRH2O43555 120 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 ANAPC13Q9BS18 74 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
CDH3-201ENST00000264012 GATD1Q8NB37 220 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
CDH3-201ENST00000264012 TLN1Q9Y490 2541 aaKnown RBP10.91□□□□□ -0.66
CDH3-201ENST00000264012 MED12LQ86YW9 2145 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 CRIP3Q6Q6R5 217 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 Q6ZPA2 131 aa10.91□□□□□ -0.66
CDH3-201ENST00000264012 BUB3O43684 328 aa10.9□□□□□ -0.66
CDH3-201ENST00000264012 MRPL35Q9NZE8 188 aaKnown RBP10.9□□□□□ -0.66
CDH3-201ENST00000264012 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
CDH3-201ENST00000264012 MRPL36Q9P0J6 103 aaKnown RBP10.9□□□□□ -0.66
CDH3-201ENST00000264012 CCL24O00175 119 aa10.9□□□□□ -0.66
CDH3-201ENST00000264012 DLX4Q92988 240 aaPredicted RBP10.9□□□□□ -0.66
CDH3-201ENST00000264012 TSSC4Q9Y5U2 329 aaPredicted RBP10.9□□□□□ -0.66
CDH3-201ENST00000264012 CRYGCP07315 174 aa10.9□□□□□ -0.67
CDH3-201ENST00000264012 C9orf118A6NHY6 69 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 LEPROTO15243 131 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 COX8AP10176 69 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 TNCP24821 2201 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 PROP1O75360 226 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 CGB3P0DN86 165 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 CGB7P0DN87 165 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 TMEM243Q9BU79 118 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 SIRPDQ9H106 197 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
CDH3-201ENST00000264012 C10orf142B7Z368 130 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 HLA-DRB4P13762 266 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 HLA-DRB4X5D2U9 266 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 KMT2EQ8IZD2 1858 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 SLURP1P55000 103 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
CDH3-201ENST00000264012 F8VRH5 84 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms