RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 METTL26Q96S19 204 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 HHLA3Q9XRX5 114 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 USP24Q9UPU5 2620 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 C14orf178Q8N769 122 aaPredicted RBP6.99□□□□□ -1.29
MSH4-201ENST00000263187 RPL39LQ96EH5 51 aaKnown RBP6.99□□□□□ -1.29
MSH4-201ENST00000263187 SIRPDQ9H106 197 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 PKD1L2Q7Z442 2459 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 EDN2P20800 178 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 S100A4P26447 101 aaKnown RBP6.98□□□□□ -1.29
MSH4-201ENST00000263187 CHAC1Q9BUX1 264 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 SMIM15Q7Z3B0 74 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 OR1N2Q8NGR9 330 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 FAM110DQ8TAY7 271 aaPredicted RBP6.98□□□□□ -1.29
MSH4-201ENST00000263187 AJUBAQ96IF1 538 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 H3BRM9 83 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 RNASE4P34096 147 aaKnown RBP6.98□□□□□ -1.29
MSH4-201ENST00000263187 GTF2H5Q6ZYL4 71 aa6.98□□□□□ -1.29
MSH4-201ENST00000263187 GNRH2O43555 120 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 IGKV3-20P01619 116 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 ATP5G2Q06055 141 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 MYOZ3Q8TDC0 251 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 EEF1AKMT3Q96AZ1 226 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 IGHV7-4-1A0A0J9YVY3 117 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 K7ERU9 68 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 COTL1Q14019 142 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 LINC01559Q495D7 138 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 Q6ZS46 218 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 OR9G4Q8NGQ1 327 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 NXT2Q9NPJ8 142 aaKnown RBP6.97□□□□□ -1.29
MSH4-201ENST00000263187 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
MSH4-201ENST00000263187 CENPVL3A0A0U1RRI6 287 aa6.96□□□□□ -1.29
MSH4-201ENST00000263187 A0A1W2PPM0 123 aa6.96□□□□□ -1.29
MSH4-201ENST00000263187 C19orf84I3L1E1 186 aa6.96□□□□□ -1.29
MSH4-201ENST00000263187 DPM2O94777 84 aa6.96□□□□□ -1.29
MSH4-201ENST00000263187 ZNF48Q96MX3 618 aaPredicted RBP6.96□□□□□ -1.29
MSH4-201ENST00000263187 K7EP34 96 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 NPFFO15130 113 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 UBE2E1P51965 193 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 LAGE3Q14657 143 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 MINOS1Q5TGZ0 78 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 OR4X2Q8NGF9 303 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 MINOS1-NBL1R4GNA1 71 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 PPBPP02775 128 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 FABP2P12104 132 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 ARL3P36405 182 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 KLRB1Q12918 225 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 Q8N8P6 123 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 NRACQ8N912 160 aa6.96□□□□□ -1.3
MSH4-201ENST00000263187 LRRK2Q5S007 2527 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 EBI3Q14213 229 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 FBXL19-AS1Q494R0 122 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 UFSP1Q6NVU6 142 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 JPT2Q9H910 190 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 TRAV41A0A0B4J266 112 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 PF4V1P10720 104 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 BLCAPP62952 87 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 PSMG3-AS1Q96PY0 264 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 HIST1H4GQ99525 98 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 MXRA5Q9NR99 2828 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 IGLV2-18A0A075B6J9 118 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 LMO4P61968 165 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 C5orf56Q8N8D9 126 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 SLC50A1Q9BRV3 221 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 C2CD3Q4AC94 2353 aa6.95□□□□□ -1.3
MSH4-201ENST00000263187 IGHV4-38-2P0DP08 117 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 ANXA2RQ3ZCQ2 193 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 COX8CQ7Z4L0 72 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 DPF1Q92782 380 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 SCGB3A1Q96QR1 104 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 CYSLTR1Q9Y271 337 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 PTPN13Q12923 2485 aa6.94□□□□□ -1.3
MSH4-201ENST00000263187 SONP18583 2426 aaKnown RBP6.93□□□□□ -1.3
MSH4-201ENST00000263187 A0A087WWL8 130 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 H3BMG7 143 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 CNFNQ9BYD5 112 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 WNK1Q9H4A3 2382 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
MSH4-201ENST00000263187 SRSF1Q07955 248 aaKnown RBP eCLIP6.93□□□□□ -1.3
MSH4-201ENST00000263187 C1orf122Q6ZSJ8 110 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 FBN2P35556 2912 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 OOSP1A8MZH6 123 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 SCGB2A2Q13296 93 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 FAM74A4Q5TZK3 123 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 SH2D6Q7Z4S9 175 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 KLHL30-AS1Q8NEE0 82 aa6.93□□□□□ -1.3
MSH4-201ENST00000263187 F5H697 171 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 WFDC2Q14508 124 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 CEND1Q8N111 149 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 OR10J6PQ8NGY7 276 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 RASL10AQ92737 203 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 NPFFR1Q9GZQ6 430 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 NIPBLQ6KC79 2804 aaeCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms