RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 LOC107984156A0A0G2JMH3 177 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 LINC01549A6NIU2 74 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 LY6LH3BQJ8 138 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 ARL17AQ8IVW1 177 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 ZNF672Q499Z4 452 aaPredicted RBP11.55□□□□□ -0.56
XRCC1-201ENST00000262887 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 RAXQ9Y2V3 346 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 ARL3P36405 182 aa11.54□□□□□ -0.56
XRCC1-201ENST00000262887 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
XRCC1-201ENST00000262887 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
XRCC1-201ENST00000262887 HES1Q14469 280 aa11.54□□□□□ -0.56
XRCC1-201ENST00000262887 PPDPFLQ8WWR9 84 aa11.54□□□□□ -0.56
XRCC1-201ENST00000262887 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 GAGE7O76087 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 GAGE12FP0CL80 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 GAGE12GP0CL81 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 GAGE12IP0CL82 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 GAGE4Q13068 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 ONECUT1Q9UBC0 465 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 SPTA1P02549 2419 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 IGHV3-35A0A0C4DH35 117 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 ZFP2Q6ZN57 461 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 PTH2Q96A98 100 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
XRCC1-201ENST00000262887 LYNX1G3V0Z9 82 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 SCGB2A1O75556 95 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 LYNX1P0DP58 116 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 FAM57AQ8TBR7 257 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 CARD19Q96LW7 228 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 SCGB3A1Q96QR1 104 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.56
XRCC1-201ENST00000262887 UBE2D1P51668 147 aa11.52□□□□□ -0.57
XRCC1-201ENST00000262887 TEN1Q86WV5 123 aa11.52□□□□□ -0.57
XRCC1-201ENST00000262887 A0A0G2JNJ9 132 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 CTSGP08311 255 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
XRCC1-201ENST00000262887 ANXA2RQ3ZCQ2 193 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 SPANXN1Q5VSR9 72 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 NPBQ8NG41 125 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 PRADC1Q9BSG0 188 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 Q9UFV3 132 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 J3KRW8 73 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 TACC2O95359 2948 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 UBE2D3P61077 147 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 UBE2D2P62837 147 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 LYRM7Q5U5X0 104 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 OR11H6Q8NGC7 330 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 CITED1Q99966 193 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 SVEP1Q4LDE5 3571 aa11.51□□□□□ -0.57
XRCC1-201ENST00000262887 IGHV7-4-1A0A0J9YVY3 117 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 CCDC179H3BU77 68 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 TCF15Q12870 199 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 NDPQ00604 133 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 CSMD1Q96PZ7 3565 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 E7EQL1 145 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 SRD5A1P18405 259 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 ORMDL2Q53FV1 153 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 TOMM6Q96B49 74 aa11.5□□□□□ -0.57
XRCC1-201ENST00000262887 RHODO00212 210 aa11.49□□□□□ -0.57
XRCC1-201ENST00000262887 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
XRCC1-201ENST00000262887 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
XRCC1-201ENST00000262887 NDUFV3P56181 108 aaKnown RBP11.49□□□□□ -0.57
XRCC1-201ENST00000262887 IGFL3Q6UXB1 125 aa11.49□□□□□ -0.57
XRCC1-201ENST00000262887 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
XRCC1-201ENST00000262887 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
XRCC1-201ENST00000262887 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
XRCC1-201ENST00000262887 LINC01548A6NM66 108 aa11.48□□□□□ -0.57
XRCC1-201ENST00000262887 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
XRCC1-201ENST00000262887 SLC25A16P16260 332 aa11.48□□□□□ -0.57
XRCC1-201ENST00000262887 YAE1D1Q9NRH1 226 aa11.48□□□□□ -0.57
XRCC1-201ENST00000262887 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 IGHV4-4A0A075B6R2 117 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 IGHV3-66A0A0C4DH42 116 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 A8MWV9 139 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 TCL1BO95988 128 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 CD7P09564 240 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
XRCC1-201ENST00000262887 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.57
XRCC1-201ENST00000262887 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
XRCC1-201ENST00000262887 KIR2DL4Q99706 377 aa11.46□□□□□ -0.57
XRCC1-201ENST00000262887 ASH1LQ9NR48 2969 aaKnown RBP11.46□□□□□ -0.57
XRCC1-201ENST00000262887 H3BVH4 76 aa11.46□□□□□ -0.58
XRCC1-201ENST00000262887 COX6B1P14854 86 aa11.46□□□□□ -0.58
XRCC1-201ENST00000262887 ID1P41134 155 aa11.46□□□□□ -0.58
XRCC1-201ENST00000262887 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.58
XRCC1-201ENST00000262887 LRBAP50851 2863 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 BUB3O43684 328 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 PRTN3P24158 256 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms