RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 COX8AP10176 69 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 LINC00310P59036 64 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 GAGE1Q13065 139 aa11.23□□□□□ -0.61
FGFR3-201ENST00000260795 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
FGFR3-201ENST00000260795 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
FGFR3-201ENST00000260795 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
FGFR3-201ENST00000260795 HOXB4P17483 251 aaPredicted RBP11.23□□□□□ -0.61
FGFR3-201ENST00000260795 RAX2Q96IS3 184 aa11.23□□□□□ -0.61
FGFR3-201ENST00000260795 DEFB112Q30KQ8 113 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 DTX2Q86UW9 622 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 K7EMI3 77 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 DSCR9P59020 149 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 C8orf86Q6ZUL3 223 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 LOXL1Q08397 574 aaPredicted RBP11.22□□□□□ -0.61
FGFR3-201ENST00000260795 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
FGFR3-201ENST00000260795 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 F6UB75 175 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 SLC25A16P16260 332 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.61
FGFR3-201ENST00000260795 LINC01587Q99440 93 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 AGPAT4-IT1Q9H0P7 198 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 CRYGCP07315 174 aa11.21□□□□□ -0.61
FGFR3-201ENST00000260795 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
FGFR3-201ENST00000260795 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 J3QKU1 62 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 DEFB1P60022 68 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 FOXE3Q13461 319 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 ORMDL2Q53FV1 153 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 ADAMTS20P59510 1910 aa11.21□□□□□ -0.62
FGFR3-201ENST00000260795 CTSGP08311 255 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 RRN3P1Q2M238 152 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 FAM110DQ8TAY7 271 aaPredicted RBP11.2□□□□□ -0.62
FGFR3-201ENST00000260795 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 K7ERJ3 54 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 CSTL1Q9H114 145 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 C9orf139Q6ZV77 190 aa11.2□□□□□ -0.62
FGFR3-201ENST00000260795 TRBV7-1A0A0A6YYK4 115 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 IGHV7-81A0A0B4J1V7 117 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 TET2Q6N021 2002 aaPredicted RBP11.19□□□□□ -0.62
FGFR3-201ENST00000260795 NDUFS8O00217 210 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 HOXA3O43365 443 aaPredicted RBP11.19□□□□□ -0.62
FGFR3-201ENST00000260795 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 UBE2E2Q96LR5 201 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 LINC00574Q9H8X3 128 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 CFHR4Q92496 578 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 AKAP13Q12802 2813 aa11.19□□□□□ -0.62
FGFR3-201ENST00000260795 VWC2LB2RUY7 222 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 OVOL1O14753 267 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 PAX1P15863 534 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 IGLV11-55A0A075B6I3 123 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 A0A1B0GXF2 115 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 HTN3P15516 51 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 INS-IGF2F8WCM5 200 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 LGALS9BQ3B8N2 356 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 LGALS9CQ6DKI2 356 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 HIST2H2BDQ6DRA6 164 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
FGFR3-201ENST00000260795 A0A0U1RRA0 63 aa11.17□□□□□ -0.62
FGFR3-201ENST00000260795 FANCD2OSQ96PS1 177 aa11.17□□□□□ -0.62
FGFR3-201ENST00000260795 SAP30O75446 220 aa11.17□□□□□ -0.62
FGFR3-201ENST00000260795 NPIPB6E9PJ23 425 aa11.17□□□□□ -0.62
FGFR3-201ENST00000260795 PPP1R17O96001 155 aa11.17□□□□□ -0.62
FGFR3-201ENST00000260795 OR11H6Q8NGC7 330 aa11.17□□□□□ -0.62
FGFR3-201ENST00000260795 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 TNFRSF18Q9Y5U5 241 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
FGFR3-201ENST00000260795 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
FGFR3-201ENST00000260795 TRAV2A0A0B4J234 112 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 OR5A1Q8NGJ0 315 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 PRORYQ9H606 182 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 AMTNQ6UX39 209 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 VCX2Q9H322 139 aa11.16□□□□□ -0.62
FGFR3-201ENST00000260795 FRYQ5TBA9 3013 aa11.15□□□□□ -0.62
FGFR3-201ENST00000260795 H7C1H1 209 aa11.15□□□□□ -0.62
FGFR3-201ENST00000260795 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
FGFR3-201ENST00000260795 SUMO2P61956 95 aaKnown RBP11.15□□□□□ -0.62
FGFR3-201ENST00000260795 LINC01545Q5VT33 79 aa11.15□□□□□ -0.62
FGFR3-201ENST00000260795 WDFY3Q8IZQ1 3526 aa11.15□□□□□ -0.62
FGFR3-201ENST00000260795 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.63
FGFR3-201ENST00000260795 ZNF80P51504 273 aaPredicted RBP11.15□□□□□ -0.63
FGFR3-201ENST00000260795 TEX29Q8N6K0 151 aa11.15□□□□□ -0.63
FGFR3-201ENST00000260795 RPL35AP18077 110 aaKnown RBP11.14□□□□□ -0.63
FGFR3-201ENST00000260795 DEFB131AP59861 70 aa11.14□□□□□ -0.63
FGFR3-201ENST00000260795 C10orf105Q8TEF2 133 aa11.14□□□□□ -0.63
FGFR3-201ENST00000260795 C9orf118A6NHY6 69 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms