RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 ARL3P36405 182 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 EMP1P54849 157 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 ZNF672Q499Z4 452 aaPredicted RBP10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 IL17RELQ6ZVW7 336 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 VPREB3Q9UKI3 123 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 IGHV3-30-5P0DP03 117 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 GFRALQ6UXV0 394 aa10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 MAFAQ8NHW3 353 aaPredicted RBP10.22□□□□□ -0.77
TUBGCP4-201ENST00000260383 IGHV3OR16-8A0A075B7F1 116 aa10.21□□□□□ -0.77
TUBGCP4-201ENST00000260383 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.77
TUBGCP4-201ENST00000260383 ELANEP08246 267 aa10.21□□□□□ -0.77
TUBGCP4-201ENST00000260383 TOMM6Q96B49 74 aa10.21□□□□□ -0.77
TUBGCP4-201ENST00000260383 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.77
TUBGCP4-201ENST00000260383 Q6Q795 121 aa10.21□□□□□ -0.78
TUBGCP4-201ENST00000260383 PRO1854Q9UHT4 67 aa10.21□□□□□ -0.78
TUBGCP4-201ENST00000260383 H7C2G1 150 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 SPRY2O43597 315 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 TMEM155Q4W5P6 130 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 C22orf34Q6ZV56 151 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 RP1L1Q8IWN7 2480 aaPredicted RBP10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV7-4-1A0A0J9YVY3 117 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 TPRP12270 2363 aaKnown RBP10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV3-23P01764 117 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV1-8P0DP01 117 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 DLX6P56179 175 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 YAE1D1Q9NRH1 226 aa10.2□□□□□ -0.78
TUBGCP4-201ENST00000260383 RNF182Q8N6D2 247 aa10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV1-3A0A0C4DH29 117 aa10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 C11orf86A6NJI1 115 aa10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 LOXP28300 417 aaPredicted RBP10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 DEFB104AQ8WTQ1 72 aa10.19□□□□□ -0.78
TUBGCP4-201ENST00000260383 DMXL1Q9Y485 3027 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 PKDREJQ9NTG1 2253 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 CRYGDP07320 174 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 FAM57AQ8TBR7 257 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGFBPL1Q8WX77 278 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 RPL39LQ96EH5 51 aaKnown RBP10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 M0QXV9 152 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 SPANXN1Q5VSR9 72 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 MDFICQ9P1T7 246 aa10.18□□□□□ -0.78
TUBGCP4-201ENST00000260383 COL27A1Q8IZC6 1860 aaPredicted RBP10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV3-35A0A0C4DH35 117 aa10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 F8W735 103 aaPredicted RBP10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 NDUFB3O43676 98 aa10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHG3P01860 377 aa10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 ORMDL2Q53FV1 153 aa10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 PRR30Q53SZ7 412 aaPredicted RBP10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 C14orf178Q8N769 122 aaPredicted RBP10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 SLC25A29Q8N8R3 303 aa10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 ZNF474Q6S9Z5 364 aaPredicted RBP10.17□□□□□ -0.78
TUBGCP4-201ENST00000260383 WNK2Q9Y3S1 2297 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 A4D1N5 150 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGHV4-39P01824 125 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 SUMO2P61956 95 aaKnown RBP10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 CCL17Q92583 94 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 LINC01587Q99440 93 aa10.16□□□□□ -0.78
TUBGCP4-201ENST00000260383 DUSP14O95147 198 aaKnown RBP10.15□□□□□ -0.78
TUBGCP4-201ENST00000260383 FOXC1Q12948 553 aa10.15□□□□□ -0.78
TUBGCP4-201ENST00000260383 SEM1Q6ZVN7 128 aa10.15□□□□□ -0.78
TUBGCP4-201ENST00000260383 LAMA5O15230 3695 aa10.15□□□□□ -0.78
TUBGCP4-201ENST00000260383 TRAV2A0A0B4J234 112 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 TCF15Q12870 199 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 LINC01620Q4KN68 170 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 TIMD4Q96H15 378 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 C21orf62Q9NYP8 219 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 MSRB2Q9Y3D2 182 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 TTC28Q96AY4 2481 aa10.15□□□□□ -0.79
TUBGCP4-201ENST00000260383 RNF223E7ERA6 249 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 TSHBP01222 138 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 IGLV1-47P01700 117 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 AGPAT4-IT1Q9H0P7 198 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 BEX4Q9NWD9 120 aaPredicted RBP10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 GPR179Q6PRD1 2367 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 TIMM23O14925 209 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 ATP5J2P56134 94 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 TMEM263Q8WUH6 116 aaKnown RBP10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 FANCD2OSQ96PS1 177 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 AMELXQ99217 191 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 CEP250Q9BV73 2442 aa10.14□□□□□ -0.79
TUBGCP4-201ENST00000260383 SVEP1Q4LDE5 3571 aa10.13□□□□□ -0.79
TUBGCP4-201ENST00000260383 TMEM178BH3BS89 294 aa10.13□□□□□ -0.79
TUBGCP4-201ENST00000260383 BUB1B-PAK6H3BSN5 160 aa10.13□□□□□ -0.79
TUBGCP4-201ENST00000260383 LGALS9O00182 355 aa10.13□□□□□ -0.79
TUBGCP4-201ENST00000260383 COX7A1P24310 79 aa10.13□□□□□ -0.79
TUBGCP4-201ENST00000260383 MFAP4P55083 255 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms