RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 HES1Q14469 280 aa10.88□□□□□ -0.67
LIMD2-201ENST00000259006 TMEM78Q5T7P6 136 aa10.88□□□□□ -0.67
LIMD2-201ENST00000259006 PIMREGQ9BSJ6 248 aa10.88□□□□□ -0.67
LIMD2-201ENST00000259006 OVOL3O00110 214 aa10.88□□□□□ -0.67
LIMD2-201ENST00000259006 HOXA3O43365 443 aaPredicted RBP10.88□□□□□ -0.67
LIMD2-201ENST00000259006 SH2D1AO60880 128 aa10.88□□□□□ -0.67
LIMD2-201ENST00000259006 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
LIMD2-201ENST00000259006 IGHV3-66A0A0C4DH42 116 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 TMEM178BH3BS89 294 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 HBDP02042 147 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 TEX36Q5VZQ5 186 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 SIGLEC15Q6ZMC9 328 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 COL12A1Q99715 3063 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 ZFYVE26Q68DK2 2539 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 NDUFS7O75251 213 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 C15orf53Q8NAA6 179 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 LINC01587Q99440 93 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
LIMD2-201ENST00000259006 LINC00574Q9H8X3 128 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 MBD3L4A6NDZ8 208 aaPredicted RBP10.87□□□□□ -0.67
LIMD2-201ENST00000259006 MBD3L3A6NE82 208 aaPredicted RBP10.87□□□□□ -0.67
LIMD2-201ENST00000259006 MBD3L5A6NJ08 208 aaPredicted RBP10.87□□□□□ -0.67
LIMD2-201ENST00000259006 C9JAW5 83 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 FAM104BQ5XKR9 115 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 MBD3L2Q8NHZ7 208 aaPredicted RBP10.87□□□□□ -0.67
LIMD2-201ENST00000259006 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
LIMD2-201ENST00000259006 MAP1AP78559 2803 aaPredicted RBP10.87□□□□□ -0.67
LIMD2-201ENST00000259006 LY6HO94772 140 aa10.86□□□□□ -0.67
LIMD2-201ENST00000259006 LEPP41159 167 aa10.86□□□□□ -0.67
LIMD2-201ENST00000259006 RNF125Q96EQ8 232 aa10.86□□□□□ -0.67
LIMD2-201ENST00000259006 TEX22C9J3V5 150 aa10.86□□□□□ -0.67
LIMD2-201ENST00000259006 SPRY2O43597 315 aa10.86□□□□□ -0.67
LIMD2-201ENST00000259006 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
LIMD2-201ENST00000259006 IGHV1-3A0A0C4DH29 117 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
LIMD2-201ENST00000259006 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 FOXC2Q99958 501 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 ZNF491Q8N8L2 437 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 KLK15Q9H2R5 256 aa10.85□□□□□ -0.67
LIMD2-201ENST00000259006 NPFFO15130 113 aa10.84□□□□□ -0.67
LIMD2-201ENST00000259006 WIPF1O43516 503 aa10.84□□□□□ -0.67
LIMD2-201ENST00000259006 ERCC8Q13216 396 aa10.84□□□□□ -0.67
LIMD2-201ENST00000259006 I3L2K1 104 aa10.84□□□□□ -0.67
LIMD2-201ENST00000259006 TMEM155Q4W5P6 130 aa10.84□□□□□ -0.67
LIMD2-201ENST00000259006 SHANK2-AS3Q9BTD1 123 aa10.84□□□□□ -0.67
LIMD2-201ENST00000259006 INS-IGF2F8WCM5 200 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 IGKCP01834 107 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 C9orf153Q5TBE3 101 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 HHLA3Q9XRX5 114 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 TCL1BO95988 128 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 K7EIM0 57 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 TIMM23O14925 209 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 SCGB1C2P0DMR2 95 aa10.83□□□□□ -0.68
LIMD2-201ENST00000259006 WI2-2373I1.2A0A1W2PRP0 233 aa10.82□□□□□ -0.68
LIMD2-201ENST00000259006 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
LIMD2-201ENST00000259006 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
LIMD2-201ENST00000259006 CACNA1AO00555 2505 aa10.82□□□□□ -0.68
LIMD2-201ENST00000259006 NCBP2LA6PVI3 153 aaKnown RBP10.82□□□□□ -0.68
LIMD2-201ENST00000259006 TRAV40A0A0B4J280 105 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 J3KT08 172 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
LIMD2-201ENST00000259006 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 RNF182Q8N6D2 247 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 TMEM158Q8WZ71 300 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 ANKHD1Q8IWZ3 2542 aaKnown RBP10.81□□□□□ -0.68
LIMD2-201ENST00000259006 BUB1B-PAK6H3BSN5 160 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 NDUFA3O95167 84 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 HERVK_113P63121 156 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 Q6ZS92 163 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 OR13C6PQ8NH95 151 aa10.81□□□□□ -0.68
LIMD2-201ENST00000259006 H3BRN7 92 aa10.8□□□□□ -0.68
LIMD2-201ENST00000259006 GFRALQ6UXV0 394 aa10.8□□□□□ -0.68
LIMD2-201ENST00000259006 TMEM30BQ3MIR4 351 aa10.8□□□□□ -0.68
LIMD2-201ENST00000259006 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
LIMD2-201ENST00000259006 RNASE6Q93091 150 aaKnown RBP10.8□□□□□ -0.68
LIMD2-201ENST00000259006 IGLC6P0CF74 106 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 NTN5Q8WTR8 489 aaPredicted RBP10.79□□□□□ -0.68
LIMD2-201ENST00000259006 PRADC1Q9BSG0 188 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 PKD1L2Q7Z442 2459 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 A0A0G2JNJ9 132 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 MYMXA0A1B0GTQ4 84 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 DLX6P56179 175 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 Q9UFV3 132 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 ASIPP42127 132 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 EFNA4P52798 201 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 FAM57AQ8TBR7 257 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 PRR25Q96S07 402 aa10.79□□□□□ -0.68
LIMD2-201ENST00000259006 PRAC2D3DTV9 90 aa10.78□□□□□ -0.68
LIMD2-201ENST00000259006 CD7P09564 240 aa10.78□□□□□ -0.68
LIMD2-201ENST00000259006 DPM2O94777 84 aa10.78□□□□□ -0.68
LIMD2-201ENST00000259006 LINC00311Q8N616 119 aa10.78□□□□□ -0.68
LIMD2-201ENST00000259006 DUX5Q96PT3 197 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms