RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 IGLL5B9A064 214 aa12.96□□□□□ -0.33
CDK4-201ENST00000257904 ZNF207O43670 478 aaKnown RBP12.96□□□□□ -0.33
CDK4-201ENST00000257904 GNLYP22749 145 aa12.96□□□□□ -0.33
CDK4-201ENST00000257904 MRAP2Q96G30 205 aa12.96□□□□□ -0.33
CDK4-201ENST00000257904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.95□□□□□ -0.34
CDK4-201ENST00000257904 H3BVH4 76 aa12.95□□□□□ -0.34
CDK4-201ENST00000257904 U3KQE9 123 aa12.95□□□□□ -0.34
CDK4-201ENST00000257904 TRBV7-1A0A0A6YYK4 115 aa12.95□□□□□ -0.34
CDK4-201ENST00000257904 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
CDK4-201ENST00000257904 SMIM2Q9BVW6 85 aa12.95□□□□□ -0.34
CDK4-201ENST00000257904 HRNRQ86YZ3 2850 aaPredicted RBP12.94□□□□□ -0.34
CDK4-201ENST00000257904 WNK2Q9Y3S1 2297 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 LINC01548A6NM66 108 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 F8VRH5 84 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 UBE2E1P51965 193 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 PRR9Q5T870 116 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 FOXI2Q6ZQN5 318 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 ZNF479Q96JC4 524 aa12.94□□□□□ -0.34
CDK4-201ENST00000257904 H7C1H1 209 aa12.93□□□□□ -0.34
CDK4-201ENST00000257904 C12orf74Q32Q52 190 aa12.93□□□□□ -0.34
CDK4-201ENST00000257904 ITLN2Q8WWU7 325 aaPredicted RBP12.93□□□□□ -0.34
CDK4-201ENST00000257904 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
CDK4-201ENST00000257904 C16orf92Q96LL3 132 aa12.93□□□□□ -0.34
CDK4-201ENST00000257904 SAA4P35542 130 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 HIST1H4GQ99525 98 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 TRBV7-3A0A075B6L6 115 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 A0A1W2PPR1 153 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 F8W1H4 67 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 ORMDL2Q53FV1 153 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
CDK4-201ENST00000257904 LINC01619G3V211 115 aa12.91□□□□□ -0.34
CDK4-201ENST00000257904 SLC25A16P16260 332 aa12.91□□□□□ -0.34
CDK4-201ENST00000257904 TOMM6Q96B49 74 aa12.91□□□□□ -0.34
CDK4-201ENST00000257904 CENPVL3A0A0U1RRI6 287 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.34
CDK4-201ENST00000257904 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 CHTOPQ9Y3Y2 248 aaKnown RBP12.9□□□□□ -0.34
CDK4-201ENST00000257904 CFAP46Q8IYW2 2715 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 MYMXA0A1B0GTQ4 84 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 IGF1P05019 195 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 ATP5G2Q06055 141 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 WFDC2Q14508 124 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 OR11H1Q8NG94 326 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 OR11H2Q8NH07 326 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 RASL10AQ92737 203 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 SCGB3A1Q96QR1 104 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
CDK4-201ENST00000257904 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
CDK4-201ENST00000257904 NEXN-AS1Q8NBZ9 246 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 SVEP1Q4LDE5 3571 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 A0A1B0GWB2 263 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 H3BMG7 143 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 M0R381 172 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 RRN3P1Q2M238 152 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 C5orf56Q8N8D9 126 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
CDK4-201ENST00000257904 USP24Q9UPU5 2620 aa12.88□□□□□ -0.35
CDK4-201ENST00000257904 J3KRW8 73 aa12.88□□□□□ -0.35
CDK4-201ENST00000257904 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
CDK4-201ENST00000257904 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
CDK4-201ENST00000257904 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 CACNA1BQ00975 2339 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 SPRY2O43597 315 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 ATP6V0BQ99437 205 aa12.87□□□□□ -0.35
CDK4-201ENST00000257904 TRAV21A0A0B4J279 112 aa12.86□□□□□ -0.35
CDK4-201ENST00000257904 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
CDK4-201ENST00000257904 AMTNQ6UX39 209 aa12.86□□□□□ -0.35
CDK4-201ENST00000257904 C14orf178Q8N769 122 aaPredicted RBP12.86□□□□□ -0.35
CDK4-201ENST00000257904 AGRNO00468 2067 aa12.86□□□□□ -0.35
CDK4-201ENST00000257904 LGALS1P09382 135 aaKnown RBP12.85□□□□□ -0.35
CDK4-201ENST00000257904 S100A4P26447 101 aaKnown RBP12.85□□□□□ -0.35
CDK4-201ENST00000257904 ASIPP42127 132 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 C2orf66Q6UXQ4 117 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 TRAV41A0A0B4J266 112 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 J3QR89 54 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 NPFFO15130 113 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 OR10J6PQ8NGY7 276 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
CDK4-201ENST00000257904 OVOL1O14753 267 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 CYSLTR1Q9Y271 337 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 TSSC4Q9Y5U2 329 aaPredicted RBP12.84□□□□□ -0.35
CDK4-201ENST00000257904 SOCS3O14543 225 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 ARL3P36405 182 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 CD300EQ496F6 205 aaPredicted RBP12.84□□□□□ -0.35
CDK4-201ENST00000257904 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 TMEM219Q86XT9 240 aa12.84□□□□□ -0.35
CDK4-201ENST00000257904 SPOCK3Q9BQ16 436 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms