RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 TRGV3P03979 118 aa12.41□□□□□ -0.42
SLC6A8-201ENST00000253122 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
SLC6A8-201ENST00000253122 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
SLC6A8-201ENST00000253122 USP9YO00507 2555 aaPredicted RBP12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 IGHV3-64A0A075B6Q5 118 aa12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 CLUHP3Q96NS8 147 aa12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 CFHR4Q92496 578 aa12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 RAX2Q96IS3 184 aa12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 LINC00527Q9UJ94 153 aa12.4□□□□□ -0.42
SLC6A8-201ENST00000253122 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.43
SLC6A8-201ENST00000253122 F8VRH5 84 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 SNCGO76070 127 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 IGKV3-20P01619 116 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 PTH2Q96A98 100 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 SPANXB1Q9NS25 103 aaPredicted RBP12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 A0A087WX48 190 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 E7EQL1 145 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 ABCA2Q9BZC7 2435 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 K7ENP7 123 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 RNASE4P34096 147 aaKnown RBP12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 ASIPP42127 132 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 INSL3P51460 131 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 ZNF256Q9Y2P7 627 aaPredicted RBP12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 MGAQ8IWI9 3026 aa12.39□□□□□ -0.43
SLC6A8-201ENST00000253122 KIR2DL4Q99706 377 aa12.38□□□□□ -0.43
SLC6A8-201ENST00000253122 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
SLC6A8-201ENST00000253122 IGHV3OR16-10A0A075B7F0 116 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 C2orf66Q6UXQ4 117 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 TRAV2A0A0B4J234 112 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 KLHL30-AS1Q8NEE0 82 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 RNF5Q99942 180 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 SCGB1A1P11684 91 aa12.37□□□□□ -0.43
SLC6A8-201ENST00000253122 E9PLD3 99 aa12.36□□□□□ -0.43
SLC6A8-201ENST00000253122 ZFAND6Q6FIF0 208 aa12.36□□□□□ -0.43
SLC6A8-201ENST00000253122 ZNF672Q499Z4 452 aaPredicted RBP12.36□□□□□ -0.43
SLC6A8-201ENST00000253122 CRYBA4P53673 196 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 TAL2Q16559 108 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 UBTD1Q9HAC8 227 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 DMDP11532 3685 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 C9JAW5 83 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
SLC6A8-201ENST00000253122 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
SLC6A8-201ENST00000253122 EEF1AKMT3Q96AZ1 226 aa12.34□□□□□ -0.43
SLC6A8-201ENST00000253122 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
SLC6A8-201ENST00000253122 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
SLC6A8-201ENST00000253122 TMEM190Q8WZ59 177 aa12.34□□□□□ -0.43
SLC6A8-201ENST00000253122 PIEZO1Q92508 2521 aa12.34□□□□□ -0.43
SLC6A8-201ENST00000253122 SHISA9B4DS77 424 aa12.33□□□□□ -0.43
SLC6A8-201ENST00000253122 GAGE2BQ13066 116 aa12.33□□□□□ -0.43
SLC6A8-201ENST00000253122 GAGE2EQ4V326 116 aa12.33□□□□□ -0.43
SLC6A8-201ENST00000253122 TM2D2Q9BX73 214 aa12.33□□□□□ -0.43
SLC6A8-201ENST00000253122 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.43
SLC6A8-201ENST00000253122 USP9XQ93008 2570 aaPredicted RBP12.33□□□□□ -0.44
SLC6A8-201ENST00000253122 SRD5A1P18405 259 aa12.33□□□□□ -0.44
SLC6A8-201ENST00000253122 FOXI1Q12951 378 aa12.33□□□□□ -0.44
SLC6A8-201ENST00000253122 C8orf86Q6ZUL3 223 aa12.33□□□□□ -0.44
SLC6A8-201ENST00000253122 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
SLC6A8-201ENST00000253122 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 ZNF56Q15929 161 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 U3KQK5 164 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 WI2-2373I1.2A0A1W2PRP0 233 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 HHLA3Q9XRX5 114 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
SLC6A8-201ENST00000253122 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 VMO1Q7Z5L0 202 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 RPL39LQ96EH5 51 aaKnown RBP12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 TRAV21A0A0B4J279 112 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 TMEM262E9PQX1 116 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 G3V318 75 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 IGLC6P0CF74 106 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 NPC2P61916 151 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
SLC6A8-201ENST00000253122 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 SS18L2Q9UHA2 77 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 CTSGP08311 255 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 PF4V1P10720 104 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 ERG28Q9UKR5 140 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 MT-ATP8P03928 68 aa12.3□□□□□ -0.44
SLC6A8-201ENST00000253122 ANKRD11Q6UB99 2663 aaPredicted RBP12.29□□□□□ -0.44
SLC6A8-201ENST00000253122 A0A087WWL8 130 aa12.29□□□□□ -0.44
SLC6A8-201ENST00000253122 FANCD2OSQ96PS1 177 aa12.29□□□□□ -0.44
SLC6A8-201ENST00000253122 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
SLC6A8-201ENST00000253122 B5MCH6 92 aa12.29□□□□□ -0.44
SLC6A8-201ENST00000253122 IGLV11-55A0A075B6I3 123 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 VCX2Q9H322 139 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 THBDP07204 575 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 COX6CP09669 75 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 IGKV3D-20A0A0C4DH25 116 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms