RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 UNQ9165/PRO28630Q6UXU0 137 aa12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 Q6ZN92 141 aa12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
CDKN1A-201ENST00000244741 CRXO43186 299 aaPredicted RBP12.85□□□□□ -0.35
CDKN1A-201ENST00000244741 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
CDKN1A-201ENST00000244741 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
CDKN1A-201ENST00000244741 MUC21A0A0G2JKD1 596 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 MUC21A0A140T8X8 626 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 IGLL1P15814 213 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 SLURP1P55000 103 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 IGHV3OR16-13A0A075B7E8 117 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 IGHV3-74A0A0B4J1X5 117 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 S100A7P31151 101 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 ERCC8Q13216 396 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
CDKN1A-201ENST00000244741 FBLL1A6NHQ2 334 aaKnown RBP12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 EDN2P20800 178 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 RNF182Q8N6D2 247 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 OR1N2Q8NGR9 330 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 A0A087X0K7 114 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 OR5AL1P0C617 328 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 G0S2P27469 103 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 HNRNPA3P51991 378 aaKnown RBP12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 SYNJ2BPP57105 145 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
CDKN1A-201ENST00000244741 OR4C46A6NHA9 309 aa12.82□□□□□ -0.36
CDKN1A-201ENST00000244741 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
CDKN1A-201ENST00000244741 DPF1Q92782 380 aa12.82□□□□□ -0.36
CDKN1A-201ENST00000244741 C20orf202A1L168 122 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 FAM104BQ5XKR9 115 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 D6R8Y8 96 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 LINC01619G3V211 115 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 BMI1P35226 326 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 TM4SF20Q53R12 229 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 TMEM158Q8WZ71 300 aa12.81□□□□□ -0.36
CDKN1A-201ENST00000244741 CCL24O00175 119 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 TSPOP30536 169 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 PRSS3P2Q8NHM4 247 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 AP5S1Q9NUS5 200 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 TIMM8BQ9Y5J9 83 aaPredicted RBP12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 U3KQK5 164 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 ZNF25P17030 456 aaPredicted RBP12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 FAM106AQ4KMX7 169 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 CITED1Q99966 193 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 LAMTOR2Q9Y2Q5 125 aa12.8□□□□□ -0.36
CDKN1A-201ENST00000244741 IGLC6P0CF74 106 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 IFI27P40305 119 aaPredicted RBP12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 TFPI2P48307 235 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 FA2HQ7L5A8 372 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 HSPB8Q9UJY1 196 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 LOC389332A0A1B0GUA5 103 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 NDUFA4O00483 81 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 ORM1P02763 201 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 C3orf56Q8N813 242 aa12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 DLX4Q92988 240 aaPredicted RBP12.79□□□□□ -0.36
CDKN1A-201ENST00000244741 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 hDV102S1A0JD36 115 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 TWIST1Q15672 202 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 COL5A1-AS1Q5SY13 56 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 PET117Q6UWS5 81 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 NDUFA11Q86Y39 141 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 STPG4Q8N801 248 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 PRELID3AQ96N28 172 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 METTL26Q96S19 204 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 NOTCH3Q9UM47 2321 aa12.78□□□□□ -0.36
CDKN1A-201ENST00000244741 H0Y8G0 127 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 C12orf54Q6X4T0 127 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 GPHB5Q86YW7 130 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 MDFIQ99750 246 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 SLC50A1Q9BRV3 221 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 SIGLEC8Q9NYZ4 499 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 MRPS16Q9Y3D3 137 aaKnown RBP12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 U3KQE9 123 aa12.77□□□□□ -0.36
CDKN1A-201ENST00000244741 ORMDL3Q8N138 153 aa12.77□□□□□ -0.37
CDKN1A-201ENST00000244741 ZNF747Q9BV97 191 aa12.77□□□□□ -0.37
CDKN1A-201ENST00000244741 TMEM191AQ9H0A3 160 aa12.77□□□□□ -0.37
CDKN1A-201ENST00000244741 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 TMEM208Q9BTX3 173 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 MSRB1Q9NZV6 116 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 TP73-AS1Q9UF72 201 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 A0A096LNJ9 63 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 SMKR1H3BMG3 65 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 OR10AG1Q8NH19 301 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms