RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 C12orf57Q99622 126 aa12.92□□□□□ -0.34
HOXC6-201ENST00000243108 SIGLEC8Q9NYZ4 499 aa12.92□□□□□ -0.34
HOXC6-201ENST00000243108 SLAQ13239 276 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 TMEM78Q5T7P6 136 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 GRIFINA4D1Z8 144 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 TP53TG3Q9ULZ0 132 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 LENEPQ9Y5L5 61 aa12.91□□□□□ -0.34
HOXC6-201ENST00000243108 AMBPP02760 352 aa12.9□□□□□ -0.34
HOXC6-201ENST00000243108 FABP4P15090 132 aa12.9□□□□□ -0.34
HOXC6-201ENST00000243108 CAMPP49913 170 aa12.9□□□□□ -0.34
HOXC6-201ENST00000243108 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
HOXC6-201ENST00000243108 C19orf73Q9NVV2 129 aa12.9□□□□□ -0.34
HOXC6-201ENST00000243108 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
HOXC6-201ENST00000243108 RPS20P60866 119 aaKnown RBP12.89□□□□□ -0.35
HOXC6-201ENST00000243108 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
HOXC6-201ENST00000243108 TMEM256Q8N2U0 113 aa12.89□□□□□ -0.35
HOXC6-201ENST00000243108 OR10D4PQ8NGN7 298 aa12.89□□□□□ -0.35
HOXC6-201ENST00000243108 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 A0A1B0GUT8 65 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 ESDP10768 282 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 LINC00310P59036 64 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 RPL11P62913 178 aaKnown RBP12.88□□□□□ -0.35
HOXC6-201ENST00000243108 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 PEMTQ9UBM1 199 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 A0A1B0GW15 77 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 A8MZ25 164 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 CD300EQ496F6 205 aaPredicted RBP12.88□□□□□ -0.35
HOXC6-201ENST00000243108 ZNF575Q86XF7 245 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 DCANP1Q8TF63 244 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
HOXC6-201ENST00000243108 RCHY1Q96PM5 261 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 SELENOKQ9Y6D0 94 aa12.88□□□□□ -0.35
HOXC6-201ENST00000243108 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
HOXC6-201ENST00000243108 ARMS2P0C7Q2 107 aa12.87□□□□□ -0.35
HOXC6-201ENST00000243108 SRIP30626 198 aa12.87□□□□□ -0.35
HOXC6-201ENST00000243108 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
HOXC6-201ENST00000243108 RIGQ13278 110 aa12.87□□□□□ -0.35
HOXC6-201ENST00000243108 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
HOXC6-201ENST00000243108 NUPR1O60356 82 aa12.86□□□□□ -0.35
HOXC6-201ENST00000243108 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
HOXC6-201ENST00000243108 TMEM18Q96B42 140 aa12.86□□□□□ -0.35
HOXC6-201ENST00000243108 TM2D3Q9BRN9 247 aa12.86□□□□□ -0.35
HOXC6-201ENST00000243108 SSBP4Q9BWG4 385 aaPredicted RBP12.86□□□□□ -0.35
HOXC6-201ENST00000243108 IGLC6P0CF74 106 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 CTRLP40313 264 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 DEFB114Q30KQ6 69 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 TMSB15BA0A087X1C1 80 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 F2Z2F3 143 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 SERF1AO75920 110 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 ID1P41134 155 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 PYY3Q5JQD4 70 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 BAGE3Q86Y29 109 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
HOXC6-201ENST00000243108 ALKBH7Q9BT30 221 aaPredicted RBP12.85□□□□□ -0.35
HOXC6-201ENST00000243108 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
HOXC6-201ENST00000243108 TRBV7-9A0A0J9YWB2 115 aa12.84□□□□□ -0.35
HOXC6-201ENST00000243108 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
HOXC6-201ENST00000243108 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
HOXC6-201ENST00000243108 LYZL1Q6UWQ5 148 aa12.84□□□□□ -0.35
HOXC6-201ENST00000243108 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
HOXC6-201ENST00000243108 STARD9Q9P2P6 4700 aa12.84□□□□□ -0.35
HOXC6-201ENST00000243108 ORM1P02763 201 aa12.83□□□□□ -0.36
HOXC6-201ENST00000243108 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
HOXC6-201ENST00000243108 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
HOXC6-201ENST00000243108 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
HOXC6-201ENST00000243108 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.36
HOXC6-201ENST00000243108 DYNC2H1Q8NCM8 4307 aaKnown RBP12.83□□□□□ -0.36
HOXC6-201ENST00000243108 CD7P09564 240 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 ZNF493Q6ZR52 646 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 FER1L6-AS1Q8NA97 138 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 WFDC10AQ9H1F0 79 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 K7EQG2 157 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 DEFB1P60022 68 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 GTSCR1Q86UQ5 136 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 APRG1Q8IVJ8 170 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 TPPP3Q9BW30 176 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
HOXC6-201ENST00000243108 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
HOXC6-201ENST00000243108 IGKV3D-20A0A0C4DH25 116 aa12.81□□□□□ -0.36
HOXC6-201ENST00000243108 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
HOXC6-201ENST00000243108 PRR9Q5T870 116 aa12.81□□□□□ -0.36
HOXC6-201ENST00000243108 DYNLRB2Q8TF09 96 aa12.81□□□□□ -0.36
HOXC6-201ENST00000243108 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
HOXC6-201ENST00000243108 F6UB75 175 aa12.8□□□□□ -0.36
HOXC6-201ENST00000243108 DNLZQ5SXM8 178 aa12.8□□□□□ -0.36
HOXC6-201ENST00000243108 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
HOXC6-201ENST00000243108 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
HOXC6-201ENST00000243108 KCNS1Q96KK3 526 aa12.79□□□□□ -0.36
HOXC6-201ENST00000243108 NIT2Q9NQR4 276 aa12.79□□□□□ -0.36
HOXC6-201ENST00000243108 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
HOXC6-201ENST00000243108 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
HOXC6-201ENST00000243108 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
HOXC6-201ENST00000243108 TENM2Q9NT68 2774 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms