RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PAQR4Q8N4S7 273 aaPredicted RBP8.93□□□□□ -0.98
MSH6-201ENST00000234420 FAM240AA0A1B0GVK7 77 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 E7EQL1 145 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 J3QQQ9 107 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 CRYGBP07316 175 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 FOXI2Q6ZQN5 318 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 GFRA4Q9GZZ7 299 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 SEM1Q6ZVN7 128 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 TAX1BP3O14907 124 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 G3V4G9 280 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 HIST2H2BDQ6DRA6 164 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 Q86TA4 180 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 TM2D2Q9BX73 214 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 SIVA1O15304 175 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 SIGLEC8Q9NYZ4 499 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 KIAA1671Q9BY89 1806 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 LINC00205P59089 165 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 SEC61GP60059 68 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 GFI1Q99684 422 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 F8VRH5 84 aa8.92□□□□□ -0.98
MSH6-201ENST00000234420 TANC1Q9C0D5 1861 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 IGKV1-9A0A0C4DH69 117 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 BUB1B-PAK6H3BSN5 160 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 IGHV1-8P0DP01 117 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 K7ENP7 123 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 PIFOQ8TCI5 191 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 LINC00271P0C7V0 271 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 G3V318 75 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 IGLC1P0CG04 106 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 ZNF883P0CG24 379 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 TRGV9Q99603 122 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 CFHR4Q92496 578 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 IGLV2-18A0A075B6J9 118 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 I3L3M4 83 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 PROP1O75360 226 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 FGFBP3Q8TAT2 258 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 LYZL4Q96KX0 146 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 SIGLEC9Q9Y336 463 aa8.91□□□□□ -0.98
MSH6-201ENST00000234420 FOXI1Q12951 378 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 TMEM14EPQ6UXP3 125 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 TNS1Q9HBL0 1735 aaKnown RBP8.9□□□□□ -0.98
MSH6-201ENST00000234420 MLANAQ16655 118 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 C1orf195Q5TG92 126 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 C5orf24Q7Z6I8 188 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 SRCAPQ6ZRS2 3230 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 FAM120AOSQ5T036 256 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
MSH6-201ENST00000234420 NDUFS7O75251 213 aa8.9□□□□□ -0.99
MSH6-201ENST00000234420 IGHV4OR15-8A0A075B7B6 117 aa8.89□□□□□ -0.99
MSH6-201ENST00000234420 A0A087WW49 117 aa8.89□□□□□ -0.99
MSH6-201ENST00000234420 PRSS46E5RG02 174 aa8.89□□□□□ -0.99
MSH6-201ENST00000234420 SLURP1P55000 103 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 DEFB113Q30KQ7 82 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 ATP6V0E1O15342 81 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 FOXE3Q13461 319 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 C9orf66Q5T8R8 295 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 ROS1P08922 2347 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 WBP1Q96G27 269 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 TRAV23DV6A0A075B6W5 121 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 SDHAF1A6NFY7 115 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 FUSP35637 526 aaKnown RBP eCLIP8.88□□□□□ -0.99
MSH6-201ENST00000234420 GP9P14770 177 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 LHFPL1Q86WI0 220 aa8.88□□□□□ -0.99
MSH6-201ENST00000234420 NDUFV3P56181 108 aaKnown RBP8.87□□□□□ -0.99
MSH6-201ENST00000234420 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 NREPQ16612 68 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 FAM223BA6NKX1 122 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 C9orf139Q6ZV77 190 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 FAM223AQ8IWN6 122 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 FBLN5Q9UBX5 448 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 IGHV4-59P01825 116 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 COX7B2Q8TF08 81 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 RNF152Q8N8N0 203 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 COL5A3P25940 1745 aaPredicted RBP8.87□□□□□ -0.99
MSH6-201ENST00000234420 A0A096LNI7 61 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 SIPA1L1O43166 1804 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 LY75O60449 1722 aa8.87□□□□□ -0.99
MSH6-201ENST00000234420 C15orf62A8K5M9 175 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 V9GYV3 84 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 TRBV12-3P01733 135 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 CTHRC1Q96CG8 243 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 FAM110AQ9BQ89 295 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 UBE2D4Q9Y2X8 147 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 IGHV1-69DA0A0B4J2H0 117 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 IGHV1-69P01742 117 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 VSIG2Q96IQ7 327 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 PCDH15Q96QU1 1955 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 SMIM27A0A1W2PRY6 76 aa8.86□□□□□ -0.99
MSH6-201ENST00000234420 ICOSQ9Y6W8 199 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms