RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 NDUFS6O75380 124 aaKnown RBP13.67□□□□□ -0.22
CENPA-201ENST00000233505 RPL35P42766 123 aaKnown RBP13.67□□□□□ -0.22
CENPA-201ENST00000233505 ZNF767PQ75MW2 155 aa13.67□□□□□ -0.22
CENPA-201ENST00000233505 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
CENPA-201ENST00000233505 MLST8Q9BVC4 326 aa13.67□□□□□ -0.22
CENPA-201ENST00000233505 SDF2L1Q9HCN8 221 aa13.67□□□□□ -0.22
CENPA-201ENST00000233505 NAGKQ9UJ70 344 aa13.67□□□□□ -0.22
CENPA-201ENST00000233505 DEFB131BA0A096LNP1 70 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 FABP5P3A8MUU1 101 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 SPINK4O60575 86 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 ZNF506Q5JVG8 444 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 BAGE2Q86Y30 109 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 C18orf15Q96N68 181 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 C11orf21Q9P2W6 132 aa13.66□□□□□ -0.22
CENPA-201ENST00000233505 IGHV3-16A0A0C4DH30 117 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 RBFOX3A6NFN3 312 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 DEFB130BP0DP73 79 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 DEFB130AP0DP74 79 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 TCTAP57738 103 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 LGALS9BQ3B8N2 356 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 FAM162BQ5T6X4 162 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 SMIM12Q96EX1 92 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 SPXQ9BT56 116 aa13.65□□□□□ -0.22
CENPA-201ENST00000233505 TMEM250H0YL14 139 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 TYMSP04818 313 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 CRIP1P50238 77 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 FAM210BQ96KR6 192 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 DERL1Q9BUN8 251 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 LYSTQ99698 3801 aa13.64□□□□□ -0.23
CENPA-201ENST00000233505 FAM210AQ96ND0 272 aa13.63□□□□□ -0.23
CENPA-201ENST00000233505 MED9Q9NWA0 146 aa13.63□□□□□ -0.23
CENPA-201ENST00000233505 DNAH1Q9P2D7 4330 aa13.63□□□□□ -0.23
CENPA-201ENST00000233505 ALMS1Q8TCU4 4167 aa13.62□□□□□ -0.23
CENPA-201ENST00000233505 SH2D1AO60880 128 aa13.62□□□□□ -0.23
CENPA-201ENST00000233505 ATP5G1P05496 136 aa13.62□□□□□ -0.23
CENPA-201ENST00000233505 CENPWQ5EE01 88 aa13.62□□□□□ -0.23
CENPA-201ENST00000233505 Q6ZTI0 123 aa13.62□□□□□ -0.23
CENPA-201ENST00000233505 TRGV1A0A0A0MS02 117 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 GNRH2O43555 120 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 GAGE7O76087 117 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
CENPA-201ENST00000233505 LCE6AA0A183 80 aa13.6□□□□□ -0.23
CENPA-201ENST00000233505 LINC01559Q495D7 138 aa13.6□□□□□ -0.23
CENPA-201ENST00000233505 TOR2AQ5JU69 321 aa13.6□□□□□ -0.23
CENPA-201ENST00000233505 NHLRC2Q8NBF2 726 aa13.6□□□□□ -0.23
CENPA-201ENST00000233505 KRBOX1C9JBD0 128 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 GNG4P50150 75 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 DNLZQ5SXM8 178 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 RASL10AQ92737 203 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 PTH2Q96A98 100 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 C9orf85Q96MD7 179 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 NDUFAF3Q9BU61 184 aa13.59□□□□□ -0.23
CENPA-201ENST00000233505 TRBV20OR9-2A0A075B6H5 130 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 B4DEV8 164 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 IGLL5B9A064 214 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 C9JCJ5 164 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 M0R2P5 195 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 IGLV2-8P01709 118 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 ORM1P02763 201 aa13.58□□□□□ -0.24
CENPA-201ENST00000233505 EIF5A2Q9GZV4 153 aaKnown RBP13.58□□□□□ -0.24
CENPA-201ENST00000233505 MRPL16Q9NX20 251 aaKnown RBP13.58□□□□□ -0.24
CENPA-201ENST00000233505 RAB19A4D1S5 217 aa13.57□□□□□ -0.24
CENPA-201ENST00000233505 CXCL1P09341 107 aa13.57□□□□□ -0.24
CENPA-201ENST00000233505 HTN3P15516 51 aa13.57□□□□□ -0.24
CENPA-201ENST00000233505 ASIPP42127 132 aa13.57□□□□□ -0.24
CENPA-201ENST00000233505 BIN3Q9NQY0 253 aa13.57□□□□□ -0.24
CENPA-201ENST00000233505 RNASE3P12724 160 aaKnown RBP13.56□□□□□ -0.24
CENPA-201ENST00000233505 PARLQ9H300 379 aa13.56□□□□□ -0.24
CENPA-201ENST00000233505 APLNQ9ULZ1 77 aa13.56□□□□□ -0.24
CENPA-201ENST00000233505 HYDINQ4G0P3 5121 aa13.55□□□□□ -0.24
CENPA-201ENST00000233505 F5H768 121 aa13.55□□□□□ -0.24
CENPA-201ENST00000233505 M0R036 132 aa13.55□□□□□ -0.24
CENPA-201ENST00000233505 S100A4P26447 101 aaKnown RBP13.55□□□□□ -0.24
CENPA-201ENST00000233505 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
CENPA-201ENST00000233505 PCNPQ8WW12 178 aaKnown RBP13.55□□□□□ -0.24
CENPA-201ENST00000233505 SMDT1Q9H4I9 107 aa13.55□□□□□ -0.24
CENPA-201ENST00000233505 IL36BQ9NZH7 164 aa13.55□□□□□ -0.24
CENPA-201ENST00000233505 PRR27Q6MZM9 219 aa13.54□□□□□ -0.24
CENPA-201ENST00000233505 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
CENPA-201ENST00000233505 ZNF575Q86XF7 245 aa13.54□□□□□ -0.24
CENPA-201ENST00000233505 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
CENPA-201ENST00000233505 MED14OSP0DP75 135 aa13.53□□□□□ -0.24
CENPA-201ENST00000233505 RAB14P61106 215 aa13.53□□□□□ -0.24
CENPA-201ENST00000233505 C15orf53Q8NAA6 179 aa13.53□□□□□ -0.24
CENPA-201ENST00000233505 TRAV4A0A0B4J268 109 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 C19orf71A6NCJ1 209 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 MGST1P10620 155 aaKnown RBP13.52□□□□□ -0.25
CENPA-201ENST00000233505 HOXA5P20719 270 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 OR5I1Q13606 314 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 ZNF876PQ49A33 203 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 LINC00476Q8WZB0 136 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms