RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
SF3A2-201ENST00000221494 KLK9Q9UKQ9 250 aa12.3□□□□□ -0.44
SF3A2-201ENST00000221494 UTP20O75691 2785 aaKnown RBP12.29□□□□□ -0.44
SF3A2-201ENST00000221494 K7EMI3 77 aa12.29□□□□□ -0.44
SF3A2-201ENST00000221494 ATP5J2P56134 94 aa12.29□□□□□ -0.44
SF3A2-201ENST00000221494 LAGE3Q14657 143 aa12.29□□□□□ -0.44
SF3A2-201ENST00000221494 M0R1W7 72 aa12.29□□□□□ -0.44
SF3A2-201ENST00000221494 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
SF3A2-201ENST00000221494 NCBP2LA6PVI3 153 aaKnown RBP12.28□□□□□ -0.44
SF3A2-201ENST00000221494 SLC25A16P16260 332 aa12.28□□□□□ -0.44
SF3A2-201ENST00000221494 C12orf74Q32Q52 190 aa12.28□□□□□ -0.44
SF3A2-201ENST00000221494 Q8TAT8 98 aa12.28□□□□□ -0.44
SF3A2-201ENST00000221494 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.44
SF3A2-201ENST00000221494 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.44
SF3A2-201ENST00000221494 MRAP2Q96G30 205 aa12.27□□□□□ -0.44
SF3A2-201ENST00000221494 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.44
SF3A2-201ENST00000221494 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
SF3A2-201ENST00000221494 ODF3BA8MYP8 253 aa12.27□□□□□ -0.45
SF3A2-201ENST00000221494 TCTAP57738 103 aa12.27□□□□□ -0.45
SF3A2-201ENST00000221494 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
SF3A2-201ENST00000221494 WFDC3Q8IUB2 231 aa12.27□□□□□ -0.45
SF3A2-201ENST00000221494 CTSGP08311 255 aa12.26□□□□□ -0.45
SF3A2-201ENST00000221494 AZU1P20160 251 aa12.26□□□□□ -0.45
SF3A2-201ENST00000221494 NRACQ8N912 160 aa12.26□□□□□ -0.45
SF3A2-201ENST00000221494 TACC2O95359 2948 aa12.26□□□□□ -0.45
SF3A2-201ENST00000221494 EBI3Q14213 229 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 ATP6V0E2Q8NHE4 81 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 MRPL35Q9NZE8 188 aaKnown RBP12.25□□□□□ -0.45
SF3A2-201ENST00000221494 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 F8VRH5 84 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 H7C1H1 209 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 K7ERJ3 54 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 DYNAPQ8N1N2 210 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 Q8N6K4 173 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
SF3A2-201ENST00000221494 TRAV40A0A0B4J280 105 aa12.24□□□□□ -0.45
SF3A2-201ENST00000221494 IGHV4-39P01824 125 aa12.24□□□□□ -0.45
SF3A2-201ENST00000221494 DLX1P56177 255 aa12.24□□□□□ -0.45
SF3A2-201ENST00000221494 TMEM160Q9NX00 188 aa12.24□□□□□ -0.45
SF3A2-201ENST00000221494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.23□□□□□ -0.45
SF3A2-201ENST00000221494 PRTN3P24158 256 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 LCNL1Q6ZST4 164 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 CCL19Q99731 98 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 TSSC4Q9Y5U2 329 aaPredicted RBP12.23□□□□□ -0.45
SF3A2-201ENST00000221494 ORMDL2Q53FV1 153 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 C5orf47Q569G3 176 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 HIST1H4GQ99525 98 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 LENEPQ9Y5L5 61 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
SF3A2-201ENST00000221494 ABCA1O95477 2261 aa12.23□□□□□ -0.45
SF3A2-201ENST00000221494 IGKV3D-20A0A0C4DH25 116 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 COX6B1P14854 86 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 WFDC2Q14508 124 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 RAX2Q96IS3 184 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 PRO0461Q9UI25 63 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 CRYBG3Q68DQ2 2970 aa12.22□□□□□ -0.45
SF3A2-201ENST00000221494 IGHV7-4-1A0A0J9YVY3 117 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 BUB3O43684 328 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 MAPKAPK5-AS1Q8N8E1 139 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 C20orf78Q9BR46 151 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
SF3A2-201ENST00000221494 LINC01549A6NIU2 74 aa12.21□□□□□ -0.46
SF3A2-201ENST00000221494 FAM110DQ8TAY7 271 aaPredicted RBP12.21□□□□□ -0.46
SF3A2-201ENST00000221494 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.46
SF3A2-201ENST00000221494 BPESC1Q9GZL8 116 aa12.21□□□□□ -0.46
SF3A2-201ENST00000221494 GEMIN7Q9H840 131 aaKnown RBP12.21□□□□□ -0.46
SF3A2-201ENST00000221494 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.46
SF3A2-201ENST00000221494 S4R3C0 116 aa12.21□□□□□ -0.46
SF3A2-201ENST00000221494 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
SF3A2-201ENST00000221494 HLA-DMBP28068 263 aa12.2□□□□□ -0.46
SF3A2-201ENST00000221494 HES1Q14469 280 aa12.2□□□□□ -0.46
SF3A2-201ENST00000221494 TMEM78Q5T7P6 136 aa12.2□□□□□ -0.46
SF3A2-201ENST00000221494 LYRM7Q5U5X0 104 aa12.2□□□□□ -0.46
SF3A2-201ENST00000221494 SPAG8Q99932 426 aaPredicted RBP12.2□□□□□ -0.46
SF3A2-201ENST00000221494 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
SF3A2-201ENST00000221494 GATA1P15976 413 aaPredicted RBP12.19□□□□□ -0.46
SF3A2-201ENST00000221494 ZFP36P26651 326 aaKnown RBP12.19□□□□□ -0.46
SF3A2-201ENST00000221494 NDPQ00604 133 aa12.19□□□□□ -0.46
SF3A2-201ENST00000221494 TOMM6Q96B49 74 aa12.19□□□□□ -0.46
SF3A2-201ENST00000221494 LMO4P61968 165 aa12.19□□□□□ -0.46
SF3A2-201ENST00000221494 PRB3Q04118 309 aaPredicted RBP12.19□□□□□ -0.46
SF3A2-201ENST00000221494 ERCC8Q13216 396 aa12.19□□□□□ -0.46
SF3A2-201ENST00000221494 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
SF3A2-201ENST00000221494 USP9YO00507 2555 aaPredicted RBP12.19□□□□□ -0.46
SF3A2-201ENST00000221494 FBN2P35556 2912 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 H3BMG7 143 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 M0R381 172 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 TRGV3P03979 118 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 NRGNQ92686 78 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms