RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 DNAH9Q9NYC9 4486 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 SMIM9A6NGZ8 99 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 F8W036 122 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 MIFP14174 115 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 RPL23P62829 140 aaKnown RBP19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 Q8NAQ8 132 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 LINC00467Q9BRT7 94 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 TMSB15BA0A087X1C1 80 aa19.64■□□□□ 0.73
CHMP4B-201ENST00000217402 IGKV3D-20A0A0C4DH25 116 aa19.64■□□□□ 0.73
CHMP4B-201ENST00000217402 RNASE7Q9H1E1 156 aaKnown RBP19.64■□□□□ 0.73
CHMP4B-201ENST00000217402 SDF2L1Q9HCN8 221 aa19.64■□□□□ 0.73
CHMP4B-201ENST00000217402 B4DEV8 164 aa19.63■□□□□ 0.73
CHMP4B-201ENST00000217402 RPL19P84098 196 aaKnown RBP19.63■□□□□ 0.73
CHMP4B-201ENST00000217402 TDRG1Q3Y452 100 aa19.63■□□□□ 0.73
CHMP4B-201ENST00000217402 KCNS1Q96KK3 526 aa19.63■□□□□ 0.73
CHMP4B-201ENST00000217402 C19orf71A6NCJ1 209 aa19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 GNRH2O43555 120 aa19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 TYMSP04818 313 aa19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 EMP1P54849 157 aa19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 TMEM263Q8WUH6 116 aaKnown RBP19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 P01737 135 aa19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 LINC01559Q495D7 138 aa19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 RNASE8Q8TDE3 154 aaKnown RBP19.62■□□□□ 0.73
CHMP4B-201ENST00000217402 COL7A1Q02388 2944 aa19.61■□□□□ 0.73
CHMP4B-201ENST00000217402 HUWE1Q7Z6Z7 4374 aaKnown RBP19.61■□□□□ 0.73
CHMP4B-201ENST00000217402 KRBOX1C9JBD0 128 aa19.61■□□□□ 0.73
CHMP4B-201ENST00000217402 C16orf74Q96GX8 76 aa19.61■□□□□ 0.73
CHMP4B-201ENST00000217402 TRGV11A0A075B6L2 103 aa19.6■□□□□ 0.73
CHMP4B-201ENST00000217402 ERVFC1-1P60608 527 aa19.6■□□□□ 0.73
CHMP4B-201ENST00000217402 IBA57Q5T440 356 aaKnown RBP19.6■□□□□ 0.73
CHMP4B-201ENST00000217402 NUDT10Q8NFP7 164 aa19.6■□□□□ 0.73
CHMP4B-201ENST00000217402 ISOC2Q96AB3 205 aa19.6■□□□□ 0.73
CHMP4B-201ENST00000217402 NUDT11Q96G61 164 aa19.6■□□□□ 0.73
CHMP4B-201ENST00000217402 TMEM189A5PLL7 270 aa19.59■□□□□ 0.73
CHMP4B-201ENST00000217402 NDUFA5Q16718 116 aa19.59■□□□□ 0.73
CHMP4B-201ENST00000217402 SEC11CQ9BY50 192 aa19.59■□□□□ 0.73
CHMP4B-201ENST00000217402 MDFICQ9P1T7 246 aa19.59■□□□□ 0.73
CHMP4B-201ENST00000217402 GRIFINA4D1Z8 144 aa19.58■□□□□ 0.73
CHMP4B-201ENST00000217402 OR2D3Q8NGH3 330 aa19.58■□□□□ 0.73
CHMP4B-201ENST00000217402 GSN-AS1Q9NRJ2 163 aa19.58■□□□□ 0.73
CHMP4B-201ENST00000217402 A0A0J9YWU9 116 aa19.58■□□□□ 0.72
CHMP4B-201ENST00000217402 ZNF493Q6ZR52 646 aa19.58■□□□□ 0.72
CHMP4B-201ENST00000217402 C11orf72Q8NBR9 251 aa19.58■□□□□ 0.72
CHMP4B-201ENST00000217402 PLAC8L1A1L4L8 177 aa19.57■□□□□ 0.72
CHMP4B-201ENST00000217402 U3KQK5 164 aa19.57■□□□□ 0.72
CHMP4B-201ENST00000217402 IGHV3-16A0A0C4DH30 117 aa19.56■□□□□ 0.72
CHMP4B-201ENST00000217402 ZNF415Q09FC8 603 aa19.56■□□□□ 0.72
CHMP4B-201ENST00000217402 FAM231DQ6ZW35 169 aa19.56■□□□□ 0.72
CHMP4B-201ENST00000217402 ASIPP42127 132 aa19.55■□□□□ 0.72
CHMP4B-201ENST00000217402 C11orf68Q9H3H3 251 aaKnown RBP19.55■□□□□ 0.72
CHMP4B-201ENST00000217402 RPP21Q9H633 154 aaKnown RBP19.55■□□□□ 0.72
CHMP4B-201ENST00000217402 TIMM8BQ9Y5J9 83 aaPredicted RBP19.55■□□□□ 0.72
CHMP4B-201ENST00000217402 SNURFLB1AK76 121 aa19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 PNRC1Q12796 327 aaPredicted RBP19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 ZNF575Q86XF7 245 aa19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 SFRP2Q96HF1 295 aa19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 GATCO43716 136 aaKnown RBP19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 GZMBP10144 247 aa19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 S100A4P26447 101 aaKnown RBP19.54■□□□□ 0.72
CHMP4B-201ENST00000217402 TCL1AP56279 114 aa19.53■□□□□ 0.72
CHMP4B-201ENST00000217402 C15orf54Q8N8G6 183 aa19.53■□□□□ 0.72
CHMP4B-201ENST00000217402 NOP10Q9NPE3 64 aaKnown RBP19.53■□□□□ 0.72
CHMP4B-201ENST00000217402 OSTCQ9NRP0 149 aa19.53■□□□□ 0.72
CHMP4B-201ENST00000217402 H3BVH4 76 aa19.52■□□□□ 0.72
CHMP4B-201ENST00000217402 C10orf91Q5T1B1 145 aa19.52■□□□□ 0.72
CHMP4B-201ENST00000217402 RNASE3P12724 160 aaKnown RBP19.51■□□□□ 0.71
CHMP4B-201ENST00000217402 CARHSP1Q9Y2V2 147 aaKnown RBP19.51■□□□□ 0.71
CHMP4B-201ENST00000217402 RPS20P60866 119 aaKnown RBP19.51■□□□□ 0.71
CHMP4B-201ENST00000217402 OR10G8Q8NGN5 311 aa19.51■□□□□ 0.71
CHMP4B-201ENST00000217402 IL17DQ8TAD2 202 aa19.51■□□□□ 0.71
CHMP4B-201ENST00000217402 CELA1Q9UNI1 258 aa19.51■□□□□ 0.71
CHMP4B-201ENST00000217402 FAM222AQ5U5X8 452 aa19.5■□□□□ 0.71
CHMP4B-201ENST00000217402 XKRY2A2RUG3 117 aa19.49■□□□□ 0.71
CHMP4B-201ENST00000217402 STAB2Q8WWQ8 2551 aa19.48■□□□□ 0.71
CHMP4B-201ENST00000217402 ARMS2P0C7Q2 107 aa19.48■□□□□ 0.71
CHMP4B-201ENST00000217402 C9orf85Q96MD7 179 aa19.48■□□□□ 0.71
CHMP4B-201ENST00000217402 TPPP3Q9BW30 176 aa19.48■□□□□ 0.71
CHMP4B-201ENST00000217402 DKK2Q9UBU2 259 aa19.48■□□□□ 0.71
CHMP4B-201ENST00000217402 V9GYV3 84 aa19.48■□□□□ 0.71
CHMP4B-201ENST00000217402 CXCL1P09341 107 aa19.47■□□□□ 0.71
CHMP4B-201ENST00000217402 DAZ2Q13117 558 aaKnown RBP19.47■□□□□ 0.71
CHMP4B-201ENST00000217402 DNLZQ5SXM8 178 aa19.47■□□□□ 0.71
CHMP4B-201ENST00000217402 IL36BQ9NZH7 164 aa19.47■□□□□ 0.71
CHMP4B-201ENST00000217402 APOC3P02656 99 aa19.47■□□□□ 0.71
CHMP4B-201ENST00000217402 MRPL16Q9NX20 251 aaKnown RBP19.47■□□□□ 0.71
CHMP4B-201ENST00000217402 TRGV1A0A0A0MS02 117 aa19.46■□□□□ 0.71
CHMP4B-201ENST00000217402 RNF212Q495C1 297 aa19.46■□□□□ 0.71
CHMP4B-201ENST00000217402 SPXQ9BT56 116 aa19.46■□□□□ 0.71
CHMP4B-201ENST00000217402 SPART-AS1P0CW21 52 aa19.45■□□□□ 0.7
CHMP4B-201ENST00000217402 CT83Q5H943 113 aa19.45■□□□□ 0.7
CHMP4B-201ENST00000217402 Q6ZTI0 123 aa19.45■□□□□ 0.7
CHMP4B-201ENST00000217402 CXorf65A6NEN9 183 aa19.44■□□□□ 0.7
CHMP4B-201ENST00000217402 LYRM9A8MSI8 78 aa19.44■□□□□ 0.7
CHMP4B-201ENST00000217402 A8MWL6 223 aa19.44■□□□□ 0.7
CHMP4B-201ENST00000217402 FER1L6-AS1Q8NA97 138 aa19.44■□□□□ 0.7
CHMP4B-201ENST00000217402 EDA2RQ9HAV5 297 aa19.44■□□□□ 0.7
CHMP4B-201ENST00000217402 TGP01266 2768 aa19.44■□□□□ 0.7
CHMP4B-201ENST00000217402 MUC21A0A0G2JKD1 596 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 MUC21A0A140T8X8 626 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 SPINK4O60575 86 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms