RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 K7EMI3 77 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 NDUFA4O00483 81 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 OVOL1O14753 267 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 FXYD2P54710 66 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 SAMD5Q5TGI4 173 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 TRAV21A0A0B4J279 112 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 SLC25A16P16260 332 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 COTL1Q14019 142 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 TM4SF20Q53R12 229 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 ZFAND2AQ8N6M9 145 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 OR10J6PQ8NGY7 276 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 C20orf78Q9BR46 151 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 ASH1LQ9NR48 2969 aaKnown RBP10.12□□□□□ -0.79
SRP54-201ENST00000216774 BRI3O95415 125 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 MED14OSP0DP75 135 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 TAL2Q16559 108 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 CEND1Q8N111 149 aa10.12□□□□□ -0.79
SRP54-201ENST00000216774 SOCS3O14543 225 aa10.11□□□□□ -0.79
SRP54-201ENST00000216774 IGF1P05019 195 aa10.11□□□□□ -0.79
SRP54-201ENST00000216774 NEGR1Q7Z3B1 354 aa10.11□□□□□ -0.79
SRP54-201ENST00000216774 GPHB5Q86YW7 130 aa10.11□□□□□ -0.79
SRP54-201ENST00000216774 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 H7C1H1 209 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 ASIPP42127 132 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
SRP54-201ENST00000216774 PHLDA1Q8WV24 401 aaPredicted RBP10.1□□□□□ -0.79
SRP54-201ENST00000216774 TRBV7-9A0A0J9YWB2 115 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 F8VRH5 84 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 H3BUA1 57 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 SAP30O75446 220 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 UNQ9165/PRO28630Q6UXU0 137 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 USMG5Q96IX5 58 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 DPH3P1Q9H4G8 78 aa10.1□□□□□ -0.79
SRP54-201ENST00000216774 M0R381 172 aa10.09□□□□□ -0.79
SRP54-201ENST00000216774 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
SRP54-201ENST00000216774 FAM19A4Q96LR4 140 aa10.09□□□□□ -0.79
SRP54-201ENST00000216774 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
SRP54-201ENST00000216774 G3V4G9 280 aa10.09□□□□□ -0.79
SRP54-201ENST00000216774 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
SRP54-201ENST00000216774 RASL10AQ92737 203 aa10.09□□□□□ -0.79
SRP54-201ENST00000216774 PPP1R17O96001 155 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 PHLDA3Q9Y5J5 127 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 NBASA2RRP1 2371 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 IGF2RP11717 2491 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 LINC01619G3V211 115 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 CSTL1Q9H114 145 aa10.08□□□□□ -0.8
SRP54-201ENST00000216774 NHP2Q9NX24 153 aaKnown RBP10.08□□□□□ -0.8
SRP54-201ENST00000216774 K7ERJ3 54 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 IGHV4-39P01824 125 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 J3KRW8 73 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 IGHG2P01859 326 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 ANXA2RQ3ZCQ2 193 aa10.07□□□□□ -0.8
SRP54-201ENST00000216774 C14orf178Q8N769 122 aaPredicted RBP10.07□□□□□ -0.8
SRP54-201ENST00000216774 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
SRP54-201ENST00000216774 MED13LQ71F56 2210 aa10.06□□□□□ -0.8
SRP54-201ENST00000216774 ATRXP46100 2492 aa10.06□□□□□ -0.8
SRP54-201ENST00000216774 SPOCK3Q9BQ16 436 aa10.06□□□□□ -0.8
SRP54-201ENST00000216774 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 E9PLD3 99 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 NXPH4O95158 308 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
SRP54-201ENST00000216774 BRD3OSQ6XYD6 125 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 POM121L12Q8N7R1 296 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 CACNA1BQ00975 2339 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
SRP54-201ENST00000216774 SELENOKQ9Y6D0 94 aa10.05□□□□□ -0.8
SRP54-201ENST00000216774 MYMXA0A1B0GTQ4 84 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 RPL11P62913 178 aaKnown RBP10.04□□□□□ -0.8
SRP54-201ENST00000216774 C2orf66Q6UXQ4 117 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 IGLL5B9A064 214 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 RNASE3P12724 160 aaKnown RBP10.04□□□□□ -0.8
SRP54-201ENST00000216774 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 PIMREGQ9BSJ6 248 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 KLK15Q9H2R5 256 aa10.04□□□□□ -0.8
SRP54-201ENST00000216774 A6NDX4 124 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 MGPP08493 103 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 RPL32P62910 135 aaKnown RBP10.03□□□□□ -0.8
SRP54-201ENST00000216774 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 SVEP1Q4LDE5 3571 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 TRBV7-3A0A075B6L6 115 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 C19orf84I3L1E1 186 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 DEFB1P60022 68 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 FOXI2Q6ZQN5 318 aa10.03□□□□□ -0.8
SRP54-201ENST00000216774 RHPN1-AS1Q9BWJ2 59 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms