RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Klrd1O54707 179 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 MymxQ2Q5T5 84 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Cops9Q3U898 57 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm21394Q497R7 227 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 RalyQ64012 312 aaKnown RBP8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Mrps18cQ8R2L5 143 aaKnown RBP8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 1700031F05RikB1AX30 191 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 VegfcP97953 415 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Lrrc26Q91W20 331 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Mpig6bD7PDD4 242 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr918E9PVZ7 325 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Timp1P12032 205 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Trdv4Q5R1A3 115 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Lhfpl4Q5U4E0 247 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Nanos1Q80WY3 267 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ssbp3Q9D032 388 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Rnd2Q9QYM5 227 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Srsf7Q8BL97 267 aaKnown RBP8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tmem177Q8BPE4 311 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Klf17Q8CFA7 341 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Plppr2Q8VCY8 343 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr1012Q8VFJ7 311 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Kif26bQ7TNC6 2112 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm45785A0A1B0GT05 94 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 A630023A22RikJ3QP60 199 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Bet1lO35153 111 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gosr1O88630 250 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 PpoxP51175 477 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Pdlim4P70271 330 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Q3U1D9 316 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ube2v1Q9CZY3 147 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Mixl1Q9WUI0 231 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Onecut1O08755 465 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Trav15-1-dv6-1Q5R1D2 117 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tspan7Q62283 249 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Rhbdd1Q8BHC7 315 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr810Q8VFH9 312 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tmed6Q9CQG0 239 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Mrpl33Q9CQP0 65 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Psmg3Q9CZH3 122 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Prss8Q9ESD1 342 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Trav6-1A0A075B5Z8 112 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ccl7Q03366 97 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Higd1cQ76I25 96 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Cldn23Q9D7D7 296 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Pla2g2fQ9QZT4 168 aa8.63□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Supt4h1aP63271 117 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Wfdc21Q8BTE6 63 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr195Q8VGQ6 308 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 TirapQ99JY1 241 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Cox6cQ9CPQ1 76 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tmem100Q9CQG9 134 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 MNCb-2875Q9DCB3 74 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Fxyd1Q9Z239 92 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gpr132Q9Z282 382 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Nrxn2E9Q7X7 1710 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 PpyP10601 100 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Fgf4P11403 202 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Cdx2P43241 311 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Slc25a47Q6IS41 310 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Elovl5Q8BHI7 299 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 MmdQ9CQY7 238 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Mst1P26928 716 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Znf664Q4VA44 261 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ly6g6eQ8K1T6 166 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr470Q8VF65 314 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ltbp1Q8CG19 1712 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 C2cd4aE9Q861 334 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr1434Q7TQR9 312 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ptrh2Q8R2Y8 181 aaKnown RBP8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 St6galnac3Q9WUV2 305 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm2381G3UY53 305 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ifitm7G3X9Z2 141 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tmem170bP86050 132 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 NrepQ07475 68 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Prickle3Q80VL3 624 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Loxl4Q924C6 757 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tmem189Q99LQ7 271 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm5093E9PZB3 174 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Isg15Q64339 161 aaKnown RBP8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 PgpQ8CHP8 321 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr530Q8VFE8 307 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Taf1Q80UV9 1891 aa8.62□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ighv14-2A0A075B5R7 117 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Rpl27aP14115 148 aaKnown RBP8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tnfrsf26P83626 204 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr981Q8VEU2 310 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ighv1-15A0A0A6YXA5 117 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm45213A0A0U1RNZ6 101 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Fam53aE9PV82 402 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm21913J3KML9 361 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm21776J3QPJ5 361 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 V1rd19Q3KNP5 305 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Higd1bQ99JY6 98 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 AmtnQ9D3J8 213 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Nup214Q80U93 2085 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm10203F6QJ09 66 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Efna4O08542 206 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Znf524Q9D0B1 321 aa8.61□□□□□ -1.03
Ubr1-201ENSMUST00000028728 4930583I09RikQ9D2E3 102 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms