RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 OCC1Q8TAD7 63 aa12.84□□□□□ -0.35
PHGDH-230ENST00000641927 TRBV7-9A0A0J9YWB2 115 aa12.83□□□□□ -0.35
PHGDH-230ENST00000641927 GCGP01275 180 aa12.83□□□□□ -0.35
PHGDH-230ENST00000641927 CRISP2P16562 243 aa12.83□□□□□ -0.35
PHGDH-230ENST00000641927 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.35
PHGDH-230ENST00000641927 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.35
PHGDH-230ENST00000641927 XCL2Q9UBD3 114 aa12.83□□□□□ -0.35
PHGDH-230ENST00000641927 IGLV2-8P01709 118 aa12.83□□□□□ -0.36
PHGDH-230ENST00000641927 BTN1A1Q13410 526 aa12.83□□□□□ -0.36
PHGDH-230ENST00000641927 ADIRFQ15847 76 aa12.83□□□□□ -0.36
PHGDH-230ENST00000641927 PRR9Q5T870 116 aa12.83□□□□□ -0.36
PHGDH-230ENST00000641927 SMIM12Q96EX1 92 aa12.83□□□□□ -0.36
PHGDH-230ENST00000641927 MLST8Q9BVC4 326 aa12.83□□□□□ -0.36
PHGDH-230ENST00000641927 DNAH3Q8TD57 4116 aa12.82□□□□□ -0.36
PHGDH-230ENST00000641927 CA1P00915 261 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-230ENST00000641927 MORN3Q6PF18 240 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-230ENST00000641927 LINC01551Q86U37 167 aa12.82□□□□□ -0.36
PHGDH-230ENST00000641927 SVBPQ8N300 66 aa12.82□□□□□ -0.36
PHGDH-230ENST00000641927 CSTL1Q9H114 145 aa12.82□□□□□ -0.36
PHGDH-230ENST00000641927 NBEAL1Q6ZS30 2694 aa12.82□□□□□ -0.36
PHGDH-230ENST00000641927 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 KLLNB2CW77 178 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 K7EN84 100 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 ZNF80P51504 273 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-230ENST00000641927 OR5I1Q13606 314 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 SDF2L1Q9HCN8 221 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 LY96Q9Y6Y9 160 aa12.81□□□□□ -0.36
PHGDH-230ENST00000641927 AMBPP02760 352 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 APOC4P55056 127 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 RPL23P62829 140 aaKnown RBP12.8□□□□□ -0.36
PHGDH-230ENST00000641927 DEFB121Q5J5C9 76 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 C7orf71A4D174 169 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 K7EIL1 84 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 INSP01308 110 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 FAM162BQ5T6X4 162 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 BIN3Q9NQY0 253 aa12.8□□□□□ -0.36
PHGDH-230ENST00000641927 M0R036 132 aa12.79□□□□□ -0.36
PHGDH-230ENST00000641927 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-230ENST00000641927 FRMD6-AS1P0C7T7 363 aa12.79□□□□□ -0.36
PHGDH-230ENST00000641927 COX8CQ7Z4L0 72 aa12.79□□□□□ -0.36
PHGDH-230ENST00000641927 DAZAP1Q96EP5 407 aaKnown RBP12.79□□□□□ -0.36
PHGDH-230ENST00000641927 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 A8MZ25 164 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 SH2D1AO60880 128 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 SNAPINO95295 136 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 PFN1P07737 140 aaKnown RBP12.78□□□□□ -0.36
PHGDH-230ENST00000641927 CRIP1P50238 77 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 PNRC1Q12796 327 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-230ENST00000641927 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-230ENST00000641927 Q6ZQT7 251 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
PHGDH-230ENST00000641927 KIR2DL5BA0A0G2JN68 375 aa12.77□□□□□ -0.36
PHGDH-230ENST00000641927 KIR2DL5BA0A0G2JPC4 375 aa12.77□□□□□ -0.36
PHGDH-230ENST00000641927 GIG44P09565 113 aaPredicted RBP12.77□□□□□ -0.36
PHGDH-230ENST00000641927 ERVFC1-1P60608 527 aa12.77□□□□□ -0.36
PHGDH-230ENST00000641927 KIR2DL5AQ8N109 375 aa12.77□□□□□ -0.36
PHGDH-230ENST00000641927 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.36
PHGDH-230ENST00000641927 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.36
PHGDH-230ENST00000641927 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.36
PHGDH-230ENST00000641927 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
PHGDH-230ENST00000641927 Q6AWC8 147 aa12.77□□□□□ -0.37
PHGDH-230ENST00000641927 ISOC2Q96AB3 205 aa12.77□□□□□ -0.37
PHGDH-230ENST00000641927 MUC21Q5SSG8 566 aa12.76□□□□□ -0.37
PHGDH-230ENST00000641927 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
PHGDH-230ENST00000641927 ZNF324O75467 553 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-230ENST00000641927 P01737 135 aa12.75□□□□□ -0.37
PHGDH-230ENST00000641927 ORM1P02763 201 aa12.75□□□□□ -0.37
PHGDH-230ENST00000641927 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
PHGDH-230ENST00000641927 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
PHGDH-230ENST00000641927 HTN1P15515 57 aa12.75□□□□□ -0.37
PHGDH-230ENST00000641927 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
PHGDH-230ENST00000641927 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
PHGDH-230ENST00000641927 NUDT10Q8NFP7 164 aa12.74□□□□□ -0.37
PHGDH-230ENST00000641927 NUDT11Q96G61 164 aa12.74□□□□□ -0.37
PHGDH-230ENST00000641927 SFRP2Q96HF1 295 aa12.74□□□□□ -0.37
PHGDH-230ENST00000641927 LINC01587Q99440 93 aa12.74□□□□□ -0.37
PHGDH-230ENST00000641927 GOLT1BQ9Y3E0 138 aa12.74□□□□□ -0.37
PHGDH-230ENST00000641927 C19orf71A6NCJ1 209 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 UBE2CO00762 179 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 ATRAIDQ6UW56 229 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 MRAPQ8TCY5 172 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 C20orf144Q9BQM9 153 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 TMSB15BA0A087X1C1 80 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 SCO1O75880 301 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 C1orf158Q8N1D5 194 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 C11orf21Q9P2W6 132 aa12.73□□□□□ -0.37
PHGDH-230ENST00000641927 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-230ENST00000641927 H7BYZ3 331 aa12.72□□□□□ -0.37
PHGDH-230ENST00000641927 RPL19P84098 196 aaKnown RBP12.72□□□□□ -0.37
PHGDH-230ENST00000641927 TMEM256Q8N2U0 113 aa12.72□□□□□ -0.37
PHGDH-230ENST00000641927 OR10G8Q8NGN5 311 aa12.72□□□□□ -0.37
PHGDH-230ENST00000641927 TMEM189A5PLL7 270 aa12.71□□□□□ -0.37
PHGDH-230ENST00000641927 B4DEV8 164 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms