RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ZNF462Q96JM2 2506 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 A0A0G2JLM5 398 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 DEFB112Q30KQ8 113 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 SIGLEC8Q9NYZ4 499 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 LOC389332A0A1B0GUA5 103 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 OR4C46A6NHA9 309 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 IGHV4-59P01825 116 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 FAM106AQ4KMX7 169 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 ZNF738Q8NE65 137 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 MAP1LC3CQ9BXW4 147 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 HSPB8Q9UJY1 196 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 CR1P17927 2039 aa13□□□□□ -0.33
PHGDH-211ENST00000641213 CSMD2Q7Z408 3487 aa12.99□□□□□ -0.33
PHGDH-211ENST00000641213 SOCS3O14543 225 aa12.99□□□□□ -0.33
PHGDH-211ENST00000641213 IGLL1P15814 213 aa12.99□□□□□ -0.33
PHGDH-211ENST00000641213 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
PHGDH-211ENST00000641213 ZNF843Q8N446 348 aa12.99□□□□□ -0.33
PHGDH-211ENST00000641213 TIMM8BQ9Y5J9 83 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-211ENST00000641213 UBR5O95071 2799 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-211ENST00000641213 FBN2P35556 2912 aa12.99□□□□□ -0.33
PHGDH-211ENST00000641213 C20orf202A1L168 122 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 CKS2P33552 79 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 TMEM95Q3KNT9 176 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 MAPK1IP1LQ8NDC0 245 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 OR10AG1Q8NH19 301 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 ZNF580Q9UK33 172 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 A1L4Q6 167 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 PET117Q6UWS5 81 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 RNF185Q96GF1 192 aa12.98□□□□□ -0.33
PHGDH-211ENST00000641213 J3QLI3 93 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 TGFAP01135 160 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 NPYP01303 97 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 LOXL1Q08397 574 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-211ENST00000641213 FOXE3Q13461 319 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 Q6ZN92 141 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 Q6ZQT7 251 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 A0A096LNJ9 63 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 IGHV7-4-1A0A0J9YVY3 117 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 NCR2O95944 276 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 TM4SF20Q53R12 229 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 ZNF747Q9BV97 191 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
PHGDH-211ENST00000641213 PRR9Q5T870 116 aa12.96□□□□□ -0.33
PHGDH-211ENST00000641213 RHPN1-AS1Q9BWJ2 59 aa12.96□□□□□ -0.33
PHGDH-211ENST00000641213 PRSS57Q6UWY2 283 aa12.95□□□□□ -0.34
PHGDH-211ENST00000641213 LINC00477Q96M19 166 aa12.95□□□□□ -0.34
PHGDH-211ENST00000641213 DAZ1Q9NQZ3 744 aaKnown RBP12.95□□□□□ -0.34
PHGDH-211ENST00000641213 H0Y8G0 127 aa12.95□□□□□ -0.34
PHGDH-211ENST00000641213 OVOL1O14753 267 aa12.95□□□□□ -0.34
PHGDH-211ENST00000641213 PSMB8P28062 276 aa12.95□□□□□ -0.34
PHGDH-211ENST00000641213 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
PHGDH-211ENST00000641213 RPL11P62913 178 aaKnown RBP12.95□□□□□ -0.34
PHGDH-211ENST00000641213 MCRIP2Q9BUT9 160 aaKnown RBP12.95□□□□□ -0.34
PHGDH-211ENST00000641213 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
PHGDH-211ENST00000641213 POLQO75417 2590 aa12.95□□□□□ -0.34
PHGDH-211ENST00000641213 LRRK2Q5S007 2527 aa12.94□□□□□ -0.34
PHGDH-211ENST00000641213 USP9YO00507 2555 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-211ENST00000641213 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
PHGDH-211ENST00000641213 CENPEQ02224 2701 aa12.94□□□□□ -0.34
PHGDH-211ENST00000641213 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 PPBPP02775 128 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 DEFB1P60022 68 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 ZANQ9Y493 2812 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 hDV102S1A0JD36 115 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 TCF21O43680 179 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 TSPOP30536 169 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 BATFQ16520 125 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 C10orf99Q6UWK7 81 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
PHGDH-211ENST00000641213 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
PHGDH-211ENST00000641213 EDN2P20800 178 aa12.92□□□□□ -0.34
PHGDH-211ENST00000641213 K7EMT4 169 aa12.92□□□□□ -0.34
PHGDH-211ENST00000641213 RPLP1P05386 114 aaKnown RBP12.92□□□□□ -0.34
PHGDH-211ENST00000641213 ST20Q9HBF5 79 aa12.92□□□□□ -0.34
PHGDH-211ENST00000641213 SELENOKQ9Y6D0 94 aa12.92□□□□□ -0.34
PHGDH-211ENST00000641213 J3KRW8 73 aa12.91□□□□□ -0.34
PHGDH-211ENST00000641213 SNAI2O43623 268 aa12.91□□□□□ -0.34
PHGDH-211ENST00000641213 FXYD7P58549 80 aa12.91□□□□□ -0.34
PHGDH-211ENST00000641213 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
PHGDH-211ENST00000641213 LAMTOR2Q9Y2Q5 125 aa12.91□□□□□ -0.34
PHGDH-211ENST00000641213 FSHBP01225 129 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 HBDP02042 147 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 IGHV4-31P0DP07 118 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 EVI2AP22794 236 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 FAM19A4Q96LR4 140 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
PHGDH-211ENST00000641213 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 TMEM89A2RUT3 159 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 F6UB75 175 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 TCAPO15273 167 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 OR8A1Q8NGG7 326 aa12.9□□□□□ -0.34
PHGDH-211ENST00000641213 LINC01546A6NGU7 62 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms