RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 BPIFA4PQ86YQ2 179 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 C5orf17Q8NAS9 161 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 KLHL30-AS1Q8NEE0 82 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 NUP35Q8NFH5 326 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 H1FXQ92522 213 aaKnown RBP4.97□□□□□ -1.61
SCARB2-224ENST00000640880 RNASE6Q93091 150 aaKnown RBP4.97□□□□□ -1.61
SCARB2-224ENST00000640880 NDFIP1Q9BT67 221 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 GFRA4Q9GZZ7 299 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 IDI2-AS1Q9NZ38 188 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 PSG11Q9UQ72 335 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 NBASA2RRP1 2371 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 ALPK2Q86TB3 2170 aa4.97□□□□□ -1.61
SCARB2-224ENST00000640880 BOD1L1Q8NFC6 3051 aa4.96□□□□□ -1.61
SCARB2-224ENST00000640880 PCNX1Q96RV3 2341 aa4.96□□□□□ -1.61
SCARB2-224ENST00000640880 IGHV1-24A0A0C4DH33 117 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 C5orf49A4QMS7 147 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 KRTAP16-1A8MUX0 517 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 GGTLC3B5MD39 225 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 SPINK4O60575 86 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 FOXH1O75593 365 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 IGHV3-48P01763 117 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 C8orf88P0DMB2 117 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 MGST1P10620 155 aaKnown RBP4.96□□□□□ -1.62
SCARB2-224ENST00000640880 GATA2P23769 480 aaPredicted RBP4.96□□□□□ -1.62
SCARB2-224ENST00000640880 RIPPLY3P57055 190 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 EGFEM1PQ0D2K5 195 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 HSD52Q0P140 79 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 FXYD3Q14802 87 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 Q1RN00 199 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 GDF5OSQ5U4N7 250 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 SPATA31B1PQ5VZV4 182 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 C2orf91Q6ZV80 131 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 MIR17HGQ75NE6 70 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 FA2HQ7L5A8 372 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 OR4X2Q8NGF9 303 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 OR9G1Q8NH87 305 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 VSTM2AQ8TAG5 236 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF488Q96MN9 340 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 NABP2Q9BQ15 211 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 CALYQ9NYX4 217 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF492Q9P255 531 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF462Q96JM2 2506 aa4.96□□□□□ -1.62
SCARB2-224ENST00000640880 CHD6Q8TD26 2715 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 J3QR89 54 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 SLC35B1P78383 322 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 FBXL19-AS1Q494R0 122 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 BHLHA15Q7RTS1 189 aaPredicted RBP4.95□□□□□ -1.62
SCARB2-224ENST00000640880 SSX8Q7RTT4 187 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 KRTAP7-1Q8IUC3 87 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 GATD1Q8NB37 220 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 OR2K2Q8NGT1 345 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 OR10AG1Q8NH19 301 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 SIGMAR1Q99720 223 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 ENY2Q9NPA8 101 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF256Q9Y2P7 627 aaPredicted RBP4.95□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF257Q9Y2Q1 563 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 DOPEY2Q9Y3R5 2298 aa4.95□□□□□ -1.62
SCARB2-224ENST00000640880 BSNQ9UPA5 3926 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 A0A1B0GW15 77 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 A8MWL6 223 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 PEX7O00628 323 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 MRPS12O15235 138 aaKnown RBP4.94□□□□□ -1.62
SCARB2-224ENST00000640880 IGHV3-23P01764 117 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 HSPE1P61604 102 aaKnown RBP4.94□□□□□ -1.62
SCARB2-224ENST00000640880 POU2AF1Q16633 256 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 HIGD2BQ4VC39 106 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 SPINK9Q5DT21 86 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 Q6ZT83 130 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.94□□□□□ -1.62
SCARB2-224ENST00000640880 OR2Z1Q8NG97 314 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF714Q96N38 554 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 PAXXQ9BUH6 204 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 RPP21Q9H633 154 aaKnown RBP4.94□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF355PQ9NSJ1 428 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 JPT1Q9UK76 154 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 AMMECR1Q9Y4X0 333 aaPredicted RBP4.94□□□□□ -1.62
SCARB2-224ENST00000640880 KLF12Q9Y4X4 402 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 FREM1Q5H8C1 2179 aa4.94□□□□□ -1.62
SCARB2-224ENST00000640880 LOC102724200A0A096LPH7 203 aaPredicted RBP4.93□□□□□ -1.62
SCARB2-224ENST00000640880 A0A1W2PPM0 123 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 A0A1W2PRD5 423 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 HIGD1CA8MV81 97 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 ZNF207O43670 478 aaKnown RBP4.93□□□□□ -1.62
SCARB2-224ENST00000640880 LYZL6O75951 148 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 APOA2P02652 100 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 CT45A6P0DMU7 189 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 CT45A5P0DMU8 189 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 CT45A7P0DMV0 189 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 FGF6P10767 208 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 FABP2P12104 132 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 CCNOP22674 350 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 S100A7P31151 101 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 CSN1S1P47710 185 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 SUB1P53999 127 aaKnown RBP eCLIP4.93□□□□□ -1.623e-7■■■□□ 19
SCARB2-224ENST00000640880 DLX1P56177 255 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 GUSBP1Q15486 140 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 MRGPRG-AS1Q2M3A8 158 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 CT45A1Q5HYN5 189 aa4.93□□□□□ -1.62
SCARB2-224ENST00000640880 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms