RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 HYLS1Q96M11 299 aa17.56■□□□□ 0.4
VEGFA-230ENST00000640482 LENEPQ9Y5L5 61 aa17.56■□□□□ 0.4
VEGFA-230ENST00000640482 RAB2AP61019 212 aa17.55■□□□□ 0.4
VEGFA-230ENST00000640482 OR10G4Q8NGN3 311 aa17.55■□□□□ 0.4
VEGFA-230ENST00000640482 OR10G9Q8NGN4 311 aa17.55■□□□□ 0.4
VEGFA-230ENST00000640482 OR10G7Q8NGN6 311 aa17.55■□□□□ 0.4
VEGFA-230ENST00000640482 AQP10Q96PS8 301 aa17.55■□□□□ 0.4
VEGFA-230ENST00000640482 TP53TG3Q9ULZ0 132 aa17.55■□□□□ 0.4
VEGFA-230ENST00000640482 NBDYA0A0U1RRE5 68 aa17.54■□□□□ 0.4
VEGFA-230ENST00000640482 PGPA6NDG6 321 aa17.54■□□□□ 0.4
VEGFA-230ENST00000640482 Q6ZQT7 251 aa17.54■□□□□ 0.4
VEGFA-230ENST00000640482 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
VEGFA-230ENST00000640482 ZNF415Q09FC8 603 aa17.53■□□□□ 0.4
VEGFA-230ENST00000640482 ASB13Q8WXK3 278 aa17.53■□□□□ 0.4
VEGFA-230ENST00000640482 RPH3ALQ9UNE2 315 aa17.53■□□□□ 0.4
VEGFA-230ENST00000640482 ARL6IP6Q8N6S5 226 aa17.52■□□□□ 0.4
VEGFA-230ENST00000640482 HSD17B11Q8NBQ5 300 aa17.52■□□□□ 0.4
VEGFA-230ENST00000640482 OR2G3Q8NGZ4 309 aa17.52■□□□□ 0.4
VEGFA-230ENST00000640482 GIPP09681 153 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-230ENST00000640482 CDC34P49427 236 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-230ENST00000640482 Q6AWC8 147 aa17.51■□□□□ 0.39
VEGFA-230ENST00000640482 PSMG3Q9BT73 122 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-230ENST00000640482 HMGB3O15347 200 aaKnown RBP17.5■□□□□ 0.39
VEGFA-230ENST00000640482 MUC21Q5SSG8 566 aa17.5■□□□□ 0.39
VEGFA-230ENST00000640482 ST6GAL2Q96JF0 529 aa17.5■□□□□ 0.39
VEGFA-230ENST00000640482 MRPL16Q9NX20 251 aaKnown RBP17.5■□□□□ 0.39
VEGFA-230ENST00000640482 MBP02144 154 aa17.49■□□□□ 0.39
VEGFA-230ENST00000640482 FAM159AQ6UWV7 190 aa17.49■□□□□ 0.39
VEGFA-230ENST00000640482 GOLT1AQ6ZVE7 132 aa17.49■□□□□ 0.39
VEGFA-230ENST00000640482 Q9H8V8 135 aa17.49■□□□□ 0.39
VEGFA-230ENST00000640482 ARL14EPLP0DKL9 152 aa17.48■□□□□ 0.39
VEGFA-230ENST00000640482 ATP6V0CP27449 155 aa17.48■□□□□ 0.39
VEGFA-230ENST00000640482 ESRGQ1W209 222 aa17.48■□□□□ 0.39
VEGFA-230ENST00000640482 C6orf223Q8N319 242 aa17.48■□□□□ 0.39
VEGFA-230ENST00000640482 INO80EQ8NBZ0 244 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-230ENST00000640482 VSIG2Q96IQ7 327 aa17.48■□□□□ 0.39
VEGFA-230ENST00000640482 TRGV11A0A075B6L2 103 aa17.47■□□□□ 0.39
VEGFA-230ENST00000640482 STAG3L2P0CL84 134 aa17.47■□□□□ 0.39
VEGFA-230ENST00000640482 STAG3L3P0CL85 134 aa17.47■□□□□ 0.39
VEGFA-230ENST00000640482 SERF2P84101 59 aa17.47■□□□□ 0.39
VEGFA-230ENST00000640482 UPK3BQ9BT76 320 aa17.47■□□□□ 0.39
VEGFA-230ENST00000640482 SLAQ13239 276 aa17.46■□□□□ 0.39
VEGFA-230ENST00000640482 Q5BKY6 102 aa17.46■□□□□ 0.39
VEGFA-230ENST00000640482 TTC32Q5I0X7 151 aa17.46■□□□□ 0.39
VEGFA-230ENST00000640482 RAB24Q969Q5 203 aa17.46■□□□□ 0.39
VEGFA-230ENST00000640482 MRPS16Q9Y3D3 137 aaKnown RBP17.46■□□□□ 0.39
VEGFA-230ENST00000640482 A0A096LPF7 62 aa17.45■□□□□ 0.38
VEGFA-230ENST00000640482 IGHV3-53P01767 116 aa17.45■□□□□ 0.38
VEGFA-230ENST00000640482 TMEM183BQ1AE95 376 aa17.45■□□□□ 0.38
VEGFA-230ENST00000640482 TMEM183AQ8IXX5 376 aa17.45■□□□□ 0.38
VEGFA-230ENST00000640482 SPXQ9BT56 116 aa17.45■□□□□ 0.38
VEGFA-230ENST00000640482 MDFICQ9P1T7 246 aa17.45■□□□□ 0.38
VEGFA-230ENST00000640482 SERTM2A0A1B0GWG4 89 aa17.44■□□□□ 0.38
VEGFA-230ENST00000640482 PAX4O43316 350 aa17.44■□□□□ 0.38
VEGFA-230ENST00000640482 PRO0255Q9UI72 69 aa17.44■□□□□ 0.38
VEGFA-230ENST00000640482 NAGKQ9UJ70 344 aa17.44■□□□□ 0.38
VEGFA-230ENST00000640482 FXYD6-FXYD2A0A087WZ82 144 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 TRAV21A0A0B4J279 112 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 GCHFRP30047 84 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 GNG5P63218 68 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 TREM1Q9NP99 234 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 TNFSF18Q9UNG2 199 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 ICOSQ9Y6W8 199 aa17.43■□□□□ 0.38
VEGFA-230ENST00000640482 PKHD1P08F94 4074 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 PKD1P98161 4303 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 TRAV8-1A0A0A6YYK1 113 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 BORCS7-ASMTA0A0B4J1R7 106 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 TDRG1Q3Y452 100 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 C5orf17Q8NAS9 161 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 SUN5Q8TC36 379 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 NDFIP1Q9BT67 221 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 ACTR3CQ9C0K3 210 aaPredicted RBP17.42■□□□□ 0.38
VEGFA-230ENST00000640482 SH3BGRL3Q9H299 93 aa17.42■□□□□ 0.38
VEGFA-230ENST00000640482 F6UZH7 168 aa17.41■□□□□ 0.38
VEGFA-230ENST00000640482 CXorf1O96002 111 aa17.41■□□□□ 0.38
VEGFA-230ENST00000640482 OR2T35Q8NGX2 323 aa17.41■□□□□ 0.38
VEGFA-230ENST00000640482 TMEM167BQ9NRX6 74 aa17.41■□□□□ 0.38
VEGFA-230ENST00000640482 HHLA3Q9XRX5 114 aa17.41■□□□□ 0.38
VEGFA-230ENST00000640482 HERC2O95714 4834 aa17.41■□□□□ 0.38
VEGFA-230ENST00000640482 RNF222A6NCQ9 220 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 K7EQM0 130 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 MED14OSP0DP75 135 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 CRYBA4P53673 196 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 FHL2Q14192 279 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 RGS21Q2M5E4 152 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 RPL7L1Q6DKI1 246 aaKnown RBP17.4■□□□□ 0.38
VEGFA-230ENST00000640482 RASL10AQ92737 203 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 TVP23CQ96ET8 276 aa17.4■□□□□ 0.38
VEGFA-230ENST00000640482 TRGV4A0A0C4DH28 118 aa17.39■□□□□ 0.37
VEGFA-230ENST00000640482 A0A1W2PPQ1 181 aa17.39■□□□□ 0.37
VEGFA-230ENST00000640482 TCRAP04437 139 aa17.39■□□□□ 0.37
VEGFA-230ENST00000640482 TNP2Q05952 138 aa17.39■□□□□ 0.37
VEGFA-230ENST00000640482 C8orf49Q96NF6 230 aa17.39■□□□□ 0.37
VEGFA-230ENST00000640482 KCNS1Q96KK3 526 aa17.38■□□□□ 0.37
VEGFA-230ENST00000640482 SDF2L1Q9HCN8 221 aa17.38■□□□□ 0.37
VEGFA-230ENST00000640482 MRPL23Q16540 153 aaKnown RBP17.37■□□□□ 0.37
VEGFA-230ENST00000640482 IQCF2Q8IXL9 164 aa17.37■□□□□ 0.37
VEGFA-230ENST00000640482 SGK494Q96LW2 274 aa17.37■□□□□ 0.37
VEGFA-230ENST00000640482 MUC4Q99102 2169 aa17.37■□□□□ 0.37
VEGFA-230ENST00000640482 IGHV3-16A0A0C4DH30 117 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms