RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PPBPP02775 128 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 ESDP10768 282 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 WFDC2Q14508 124 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM183BQ1AE95 376 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 DHFR2Q86XF0 187 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM183AQ8IXX5 376 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 PFN4Q8NHR9 129 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 RPUSD4Q96CM3 377 aaKnown RBP2.06□□□□□ -2.08
CCDC7-213ENST00000639290 ACY3Q96HD9 319 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 JPT1Q9UK76 154 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 PSG8Q9UQ74 426 aa2.06□□□□□ -2.08
CCDC7-213ENST00000639290 IGKV1-27A0A075B6S5 117 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM30CPA0ZSE6 113 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 CPSF4LA6NMK7 179 aaKnown RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 KNCNA6PVL3 124 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM14DPA8MWL7 114 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 K7EPK0 472 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 COPEO14579 308 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 SERF1AO75920 110 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 TTRP02766 147 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 SEC11BP0C7V7 166 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 S100A3P33764 101 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 POLR2IP36954 125 aaKnown RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 RPL23P62829 140 aaKnown RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 DEFA5Q01523 94 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 ORMDL2Q53FV1 153 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 CENPWQ5EE01 88 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM256Q8N2U0 113 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 LINC00337Q8N6G1 96 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 OR52N1Q8NH53 320 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 DIRAS2Q96HU8 199 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 KCNS1Q96KK3 526 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 GINS3Q9BRX5 216 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 SAMD10Q9BYL1 202 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 UTP11Q9Y3A2 253 aaKnown RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 HSPB11Q9Y547 144 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 A0A1B0GV50 99 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 DEGS1O15121 323 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 IGHV3-7P01780 117 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 SULT1A3P0DMM9 295 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 SULT1A4P0DMN0 295 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 PPIBP23284 216 aaKnown RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 RBX1P62877 108 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 PMAIP1Q13794 54 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 CTAGE3PQ8IX95 158 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 STX19Q8N4C7 294 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 MAGOHBQ96A72 148 aaKnown RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 VSIG2Q96IQ7 327 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 ZNF556Q9HAH1 456 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM216Q9P0N5 145 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 RBM12B-AS1Q9P1G2 102 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 TIMM8BQ9Y5J9 83 aaPredicted RBP2.05□□□□□ -2.08
CCDC7-213ENST00000639290 V9GYS6 101 aa2.05□□□□□ -2.08
CCDC7-213ENST00000639290 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CCDC7-213ENST00000639290 PLAC8L1A1L4L8 177 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 KLLNB2CW77 178 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 ARPC5O15511 151 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 PDE6DO43924 150 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 TPST1O60507 370 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 YPEL1O60688 119 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 S100GP29377 79 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 FAM78BQ5VT40 261 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 FP248Q71RG6 208 aaPredicted RBP2.04□□□□□ -2.08
CCDC7-213ENST00000639290 ARL11Q969Q4 196 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 SLC35E1Q96K37 410 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 IGF2BP2-AS1Q96M15 143 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 YPEL2Q96QA6 119 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 MARVELD1Q9BSK0 173 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 GNB1LQ9BYB4 327 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 SPANXA1Q9NS26 97 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 OR52A1Q9UKL2 312 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 TMEM56-RWDD3S4R434 201 aa2.04□□□□□ -2.08
CCDC7-213ENST00000639290 IGLV11-55A0A075B6I3 123 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 TRAV14DV4A0A0A6YYC5 116 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 A0A0J9YXY3 114 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 A8MTW9 85 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 M0R1X1 148 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 MED6O75586 246 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 APOA2P02652 100 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 ZBTB25P24278 435 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 GADD45AP24522 165 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 HSPE1P61604 102 aaKnown RBP2.03□□□□□ -2.08
CCDC7-213ENST00000639290 SNRPD3P62318 126 aaKnown RBP2.03□□□□□ -2.08
CCDC7-213ENST00000639290 LTC4SQ16873 150 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 IAH1Q2TAA2 248 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-213ENST00000639290 CCDC153Q494R4 210 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 UBE2NLQ5JXB2 153 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 LPCAT3Q6P1A2 487 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 SLC25A26Q70HW3 274 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 SLC35F6Q8N357 371 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 OR51A2Q8NGJ7 313 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 OR9I1Q8NGQ6 314 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 OR2T4Q8NH00 348 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 SPACA4Q8TDM5 124 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 SLC25A46Q96AG3 418 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 LINC01587Q99440 93 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 HSD17B10Q99714 261 aaKnown RBP2.03□□□□□ -2.08
CCDC7-213ENST00000639290 RERGLQ9H628 205 aa2.03□□□□□ -2.08
CCDC7-213ENST00000639290 TPT1P8Q9HAU6 139 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms