RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
SPIN3-220ENST00000639257 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 A0A0D9SG52 128 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 A0A1W2PRE2 83 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 TCRAP04437 139 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 ATP5G1P05496 136 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 ATP5G3P48201 142 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 TCL1AP56279 114 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
SPIN3-220ENST00000639257 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
SPIN3-220ENST00000639257 GNG5P63218 68 aa12.56□□□□□ -0.4
SPIN3-220ENST00000639257 TMEM88Q6PEY1 159 aa12.56□□□□□ -0.4
SPIN3-220ENST00000639257 TRAV8-1A0A0A6YYK1 113 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 BCL2L11O43521 198 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 IGLV2-11P01706 119 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 SEC11BP0C7V7 166 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 P0DMU3 169 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 FAM231AP0DMU4 169 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 FAM231CP0DMU5 169 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 HTN3P15516 51 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 TDRG1Q3Y452 100 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 TP53TG3Q9ULZ0 132 aa12.55□□□□□ -0.4
SPIN3-220ENST00000639257 SPINK4O60575 86 aa12.54□□□□□ -0.4
SPIN3-220ENST00000639257 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
SPIN3-220ENST00000639257 TCTE3Q8IZS6 198 aa12.54□□□□□ -0.4
SPIN3-220ENST00000639257 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
SPIN3-220ENST00000639257 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
SPIN3-220ENST00000639257 RGS13O14921 159 aa12.53□□□□□ -0.4
SPIN3-220ENST00000639257 Q6ZTI0 123 aa12.53□□□□□ -0.4
SPIN3-220ENST00000639257 POM121L12Q8N7R1 296 aa12.53□□□□□ -0.4
SPIN3-220ENST00000639257 TMPRSS5Q9H3S3 457 aa12.53□□□□□ -0.4
SPIN3-220ENST00000639257 KLF12Q9Y4X4 402 aa12.53□□□□□ -0.4
SPIN3-220ENST00000639257 FBLL1A6NHQ2 334 aaKnown RBP12.52□□□□□ -0.41
SPIN3-220ENST00000639257 LGALS9BQ3B8N2 356 aa12.52□□□□□ -0.41
SPIN3-220ENST00000639257 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
SPIN3-220ENST00000639257 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.41
SPIN3-220ENST00000639257 RPH3ALQ9UNE2 315 aa12.52□□□□□ -0.41
SPIN3-220ENST00000639257 EPPK1P58107 5090 aaKnown RBP12.51□□□□□ -0.41
SPIN3-220ENST00000639257 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 MAP1LC3B2A6NCE7 125 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 FAM74A7A6NL05 159 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 F5H768 121 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 GAGE7O76087 117 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 HOXA5P20719 270 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 FHITP49789 147 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 RNF212Q495C1 297 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 STOML3Q8TAV4 291 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 ATG101Q9BSB4 218 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 NKX6-2Q9C056 277 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-220ENST00000639257 MAP1LC3BQ9GZQ8 125 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 MUC4Q99102 2169 aa12.51□□□□□ -0.41
SPIN3-220ENST00000639257 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
SPIN3-220ENST00000639257 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 ZNF471Q9BX82 626 aaPredicted RBP12.5□□□□□ -0.41
SPIN3-220ENST00000639257 TREM1Q9NP99 234 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 PSG8Q9UQ74 426 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 ARL2-SNX15V9GYD0 113 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 DNAH10Q8IVF4 4471 aa12.5□□□□□ -0.41
SPIN3-220ENST00000639257 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
SPIN3-220ENST00000639257 H3BNG1 76 aa12.49□□□□□ -0.41
SPIN3-220ENST00000639257 K7EQM0 130 aa12.49□□□□□ -0.41
SPIN3-220ENST00000639257 FLI1Q01543 452 aaPredicted RBP12.49□□□□□ -0.41
SPIN3-220ENST00000639257 ZNF415Q09FC8 603 aa12.49□□□□□ -0.41
SPIN3-220ENST00000639257 MUC21Q5SSG8 566 aa12.49□□□□□ -0.41
SPIN3-220ENST00000639257 NACAE9PAV3 2078 aa12.49□□□□□ -0.41
SPIN3-220ENST00000639257 F6UZH7 168 aa12.48□□□□□ -0.41
SPIN3-220ENST00000639257 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
SPIN3-220ENST00000639257 EIF5AP63241 154 aaKnown RBP12.48□□□□□ -0.41
SPIN3-220ENST00000639257 LGALSLQ3ZCW2 172 aaPredicted RBP12.48□□□□□ -0.41
SPIN3-220ENST00000639257 DPPA3Q6W0C5 159 aa12.48□□□□□ -0.41
SPIN3-220ENST00000639257 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
SPIN3-220ENST00000639257 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
SPIN3-220ENST00000639257 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 C1QBP02746 253 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 FAM159AQ6UWV7 190 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 HIST1H2BAQ96A08 127 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 TCEAL7Q9BRU2 100 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 NDFIP1Q9BT67 221 aa12.47□□□□□ -0.41
SPIN3-220ENST00000639257 TRGV1A0A0A0MS02 117 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 TPT1P13693 172 aaKnown RBP12.46□□□□□ -0.41
SPIN3-220ENST00000639257 FAM3BP58499 235 aaPredicted RBP12.46□□□□□ -0.41
SPIN3-220ENST00000639257 UBE2G2P60604 165 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 RASL10AQ92737 203 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 C8orf49Q96NF6 230 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 SPXQ9BT56 116 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 C11orf21Q9P2W6 132 aa12.46□□□□□ -0.41
SPIN3-220ENST00000639257 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.42
SPIN3-220ENST00000639257 TRAV26-1A0A087WT03 109 aa12.45□□□□□ -0.42
SPIN3-220ENST00000639257 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms