RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 C8orf86Q6ZUL3 223 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.55□□□□□ -0.4
CLN5-218ENST00000637397 IGFBPL1Q8WX77 278 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
CLN5-218ENST00000637397 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 CEP350Q5VT06 3117 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 ANKRD39Q53RE8 183 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 PTPRQQ9UMZ3 2332 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 H3BMG7 143 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 WISP2O76076 250 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 IGKV1-17P01599 117 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 SPINK8P0C7L1 97 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
CLN5-218ENST00000637397 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
CLN5-218ENST00000637397 CDKN1BP46527 198 aa12.53□□□□□ -0.4
CLN5-218ENST00000637397 SPXQ9BT56 116 aa12.53□□□□□ -0.4
CLN5-218ENST00000637397 PRSS22Q9GZN4 317 aa12.53□□□□□ -0.4
CLN5-218ENST00000637397 C9JAW5 83 aa12.53□□□□□ -0.4
CLN5-218ENST00000637397 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
CLN5-218ENST00000637397 MSMPQ1L6U9 139 aa12.52□□□□□ -0.4
CLN5-218ENST00000637397 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.4
CLN5-218ENST00000637397 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.4
CLN5-218ENST00000637397 PCNTO95613 3336 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 PRSS33Q8NF86 280 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 MYMXA0A1B0GTQ4 84 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 F8VRH5 84 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 LINC01545Q5VT33 79 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 USMG5Q96IX5 58 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 SMIM2Q9BVW6 85 aa12.52□□□□□ -0.41
CLN5-218ENST00000637397 DYNAPQ8N1N2 210 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 CEND1Q8N111 149 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 SIVA1O15304 175 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
CLN5-218ENST00000637397 PEMTQ9UBM1 199 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 UBE2E1P51965 193 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 UTF1Q5T230 341 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 RUSC1-AS1Q66K80 236 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 C1orf122Q6ZSJ8 110 aa12.51□□□□□ -0.41
CLN5-218ENST00000637397 A0A1W2PNU3 283 aaPredicted RBP12.5□□□□□ -0.41
CLN5-218ENST00000637397 MSRB1Q9NZV6 116 aa12.5□□□□□ -0.41
CLN5-218ENST00000637397 F8W1H4 67 aa12.5□□□□□ -0.41
CLN5-218ENST00000637397 SCRT2Q9NQ03 307 aa12.5□□□□□ -0.41
CLN5-218ENST00000637397 ANXA2RQ3ZCQ2 193 aa12.5□□□□□ -0.41
CLN5-218ENST00000637397 C2orf82Q6UX34 121 aa12.5□□□□□ -0.41
CLN5-218ENST00000637397 UTRNP46939 3433 aa12.5□□□□□ -0.41
CLN5-218ENST00000637397 STHQ8IWL8 128 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 ACACBO00763 2458 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 I3L2K1 104 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 K7EIM0 57 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 ATXN8Q156A1 80 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 AGPAT4-IT1Q9H0P7 198 aa12.49□□□□□ -0.41
CLN5-218ENST00000637397 SAP30O75446 220 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 HLA-DRB4P13762 266 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 HLA-DRB4X5D2U9 266 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 TIMM21Q9BVV7 248 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 SDHAF1A6NFY7 115 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 SPRY2O43597 315 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 PMVKQ15126 192 aa12.48□□□□□ -0.41
CLN5-218ENST00000637397 IGLV2-8P01709 118 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 C2orf70A6NJV1 201 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 NCKAP5O14513 1909 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 C12orf74Q32Q52 190 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 CFHR4Q92496 578 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 TECTAO75443 2155 aa12.47□□□□□ -0.41
CLN5-218ENST00000637397 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.41
CLN5-218ENST00000637397 GAGE12HA6NDE8 117 aa12.46□□□□□ -0.41
CLN5-218ENST00000637397 FOXE3Q13461 319 aa12.46□□□□□ -0.41
CLN5-218ENST00000637397 A0A087WX48 190 aa12.46□□□□□ -0.42
CLN5-218ENST00000637397 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.42
CLN5-218ENST00000637397 TP53TG3Q9ULZ0 132 aa12.46□□□□□ -0.42
CLN5-218ENST00000637397 KNCNA6PVL3 124 aa12.46□□□□□ -0.42
CLN5-218ENST00000637397 SHISA9B4DS77 424 aa12.46□□□□□ -0.42
CLN5-218ENST00000637397 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.42
CLN5-218ENST00000637397 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.42
CLN5-218ENST00000637397 PHLDA1Q8WV24 401 aaPredicted RBP12.46□□□□□ -0.42
CLN5-218ENST00000637397 SPINK13Q1W4C9 94 aa12.45□□□□□ -0.42
CLN5-218ENST00000637397 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
CLN5-218ENST00000637397 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
CLN5-218ENST00000637397 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
CLN5-218ENST00000637397 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
CLN5-218ENST00000637397 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
CLN5-218ENST00000637397 C1orf229Q6ZS94 237 aaPredicted RBP12.45□□□□□ -0.42
CLN5-218ENST00000637397 AZU1P20160 251 aa12.44□□□□□ -0.42
CLN5-218ENST00000637397 NUP210LQ5VU65 1888 aa12.44□□□□□ -0.42
CLN5-218ENST00000637397 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms