RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 OR10J6PQ8NGY7 276 aa9.28□□□□□ -0.92
CLN8-212ENST00000637083 ZNF747Q9BV97 191 aa9.28□□□□□ -0.92
CLN8-212ENST00000637083 ZNF462Q96JM2 2506 aa9.28□□□□□ -0.92
CLN8-212ENST00000637083 ABCA2Q9BZC7 2435 aa9.28□□□□□ -0.92
CLN8-212ENST00000637083 TCF21O43680 179 aa9.27□□□□□ -0.92
CLN8-212ENST00000637083 IGLV1-40P01703 118 aa9.27□□□□□ -0.92
CLN8-212ENST00000637083 TSPOP30536 169 aa9.27□□□□□ -0.92
CLN8-212ENST00000637083 CACNG7P62955 275 aa9.27□□□□□ -0.92
CLN8-212ENST00000637083 ZNF738Q8NE65 137 aa9.27□□□□□ -0.92
CLN8-212ENST00000637083 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.92
CLN8-212ENST00000637083 LOC389332A0A1B0GUA5 103 aa9.27□□□□□ -0.93
CLN8-212ENST00000637083 TMEM89A2RUT3 159 aa9.27□□□□□ -0.93
CLN8-212ENST00000637083 HBDP02042 147 aa9.27□□□□□ -0.93
CLN8-212ENST00000637083 COX6B1P14854 86 aa9.27□□□□□ -0.93
CLN8-212ENST00000637083 LINC01545Q5VT33 79 aa9.27□□□□□ -0.93
CLN8-212ENST00000637083 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
CLN8-212ENST00000637083 BLCAPP62952 87 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 BATFQ16520 125 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 MAJINQ3KP22 176 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 FAM106AQ4KMX7 169 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 NRGNQ92686 78 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 BBC3Q96PG8 261 aaPredicted RBP9.26□□□□□ -0.93
CLN8-212ENST00000637083 TIMM8BQ9Y5J9 83 aaPredicted RBP9.26□□□□□ -0.93
CLN8-212ENST00000637083 CSMD2Q7Z408 3487 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 MUC21A0A0G2JKD1 596 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 MUC21A0A140T8X8 626 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 K7EMT4 169 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 MUC21Q5SSG8 566 aa9.26□□□□□ -0.93
CLN8-212ENST00000637083 NXT2Q9NPJ8 142 aaKnown RBP9.26□□□□□ -0.93
CLN8-212ENST00000637083 IGHV7-4-1A0A0J9YVY3 117 aa9.25□□□□□ -0.93
CLN8-212ENST00000637083 SMAD7O15105 426 aaKnown RBP9.25□□□□□ -0.93
CLN8-212ENST00000637083 IGHV3-11P01762 117 aa9.25□□□□□ -0.93
CLN8-212ENST00000637083 UNQ9165/PRO28630Q6UXU0 137 aa9.25□□□□□ -0.93
CLN8-212ENST00000637083 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
CLN8-212ENST00000637083 DAZ1Q9NQZ3 744 aaKnown RBP9.25□□□□□ -0.93
CLN8-212ENST00000637083 PEF1Q9UBV8 284 aaKnown RBP9.25□□□□□ -0.93
CLN8-212ENST00000637083 IGHV4-4A0A075B6R2 117 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 NPYP01303 97 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 TRBV12-3P01733 135 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 CFHR3Q02985 330 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 RNF185Q96GF1 192 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 KLK15Q9H2R5 256 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 SOCS3O14543 225 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 SNAI2O43623 268 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 ID1P41134 155 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 RPL11P62913 178 aaKnown RBP9.24□□□□□ -0.93
CLN8-212ENST00000637083 LGALS9BQ3B8N2 356 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 DPF1Q92782 380 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
CLN8-212ENST00000637083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.24□□□□□ -0.934e-15■■■■□ 21.5
CLN8-212ENST00000637083 LRRK2Q5S007 2527 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 USP9YO00507 2555 aaPredicted RBP9.23□□□□□ -0.93
CLN8-212ENST00000637083 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 H0Y8G0 127 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 AVPP01185 164 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 PRSS57Q6UWY2 283 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 MSRB1Q9NZV6 116 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 UFC1Q9Y3C8 167 aa9.23□□□□□ -0.93
CLN8-212ENST00000637083 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 PSMG4Q5JS54 123 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 OR8A1Q8NGG7 326 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 SMPXQ9UHP9 88 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 A0A096LNJ9 63 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 hDV102S1A0JD36 115 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 SMKR1H3BMG3 65 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 NCR2O95944 276 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 MED14OSP0DP75 135 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 ZNF25P17030 456 aaPredicted RBP9.22□□□□□ -0.93
CLN8-212ENST00000637083 SRSF1Q07955 248 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLN8-212ENST00000637083 LOXL1Q08397 574 aaPredicted RBP9.22□□□□□ -0.93
CLN8-212ENST00000637083 FOXE3Q13461 319 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 DEFB112Q30KQ8 113 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 C20orf173Q96LM9 149 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 CENPEQ02224 2701 aa9.22□□□□□ -0.93
CLN8-212ENST00000637083 PRSS47A8MTI9 375 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 ZNF843Q8N446 348 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 OR1N2Q8NGR9 330 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 IFI27L1Q96BM0 104 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 SCRT2Q9NQ03 307 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 GOLT1BQ9Y3E0 138 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 FBN2P35556 2912 aa9.21□□□□□ -0.93
CLN8-212ENST00000637083 TGFAP01135 160 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 PSMB8P28062 276 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 FCER1GP30273 86 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 GAGE1Q13065 139 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 CSPG4Q6UVK1 2322 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 Q6ZS46 218 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 Q8N8P6 123 aa9.21□□□□□ -0.94
CLN8-212ENST00000637083 POLQO75417 2590 aa9.2□□□□□ -0.94
CLN8-212ENST00000637083 S100A4P26447 101 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms