RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-221ENST00000636012 UBE2E1P51965 193 aa12.87□□□□□ -0.35
CACNA1A-221ENST00000636012 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
CACNA1A-221ENST00000636012 ZNRF2Q8NHG8 242 aa12.87□□□□□ -0.35
CACNA1A-221ENST00000636012 CRYBA4P53673 196 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 HIST1H2BLQ99880 126 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 PNRC2Q9NPJ4 139 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 ZNF581Q9P0T4 197 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 HCFC1P51610 2035 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 CASC2Q6XLA1 102 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 I3L3M4 83 aa12.86□□□□□ -0.35
CACNA1A-221ENST00000636012 CSRP3P50461 194 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 ZNF362Q5T0B9 420 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 RMI2Q96E14 147 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 BRK1Q8WUW1 75 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 TMEM242Q9NWH2 141 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 H0Y9J4 135 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 LINC01551Q86U37 167 aa12.85□□□□□ -0.35
CACNA1A-221ENST00000636012 AMBPP02760 352 aa12.84□□□□□ -0.35
CACNA1A-221ENST00000636012 CTSGP08311 255 aa12.84□□□□□ -0.35
CACNA1A-221ENST00000636012 STPG4Q8N801 248 aa12.84□□□□□ -0.35
CACNA1A-221ENST00000636012 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
CACNA1A-221ENST00000636012 FBLN5Q9UBX5 448 aa12.84□□□□□ -0.35
CACNA1A-221ENST00000636012 SS18L2Q9UHA2 77 aa12.84□□□□□ -0.35
CACNA1A-221ENST00000636012 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
CACNA1A-221ENST00000636012 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
CACNA1A-221ENST00000636012 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
CACNA1A-221ENST00000636012 SYS1-DBNDD2H3BUS1 97 aa12.83□□□□□ -0.36
CACNA1A-221ENST00000636012 FGF6P10767 208 aa12.83□□□□□ -0.36
CACNA1A-221ENST00000636012 C15orf62A8K5M9 175 aa12.83□□□□□ -0.36
CACNA1A-221ENST00000636012 RNF144BQ7Z419 303 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 C8orf86Q6ZUL3 223 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 TRBV20-1A0A075B6N2 111 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 ZC2HC1BQ5TFG8 222 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 KIAA1549LQ6ZVL6 1849 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 TEX36Q5VZQ5 186 aa12.82□□□□□ -0.36
CACNA1A-221ENST00000636012 NDUFB8O95169 186 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 HLA-DRB4P13762 266 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 HLA-DRB4X5D2U9 266 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 TMEM75Q8N9X5 138 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 TMEM213A2RRL7 107 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 PROP1O75360 226 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 CDKN1BP46527 198 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 NMSQ5H8A3 153 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 A0A0J9YWU9 116 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 SHANK2-AS3Q9BTD1 123 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
CACNA1A-221ENST00000636012 IGHV4-59P01825 116 aa12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 UBE2AP49459 152 aa12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 B3GALT5-AS1P59052 145 aa12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 WIPF2Q8TF74 440 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-221ENST00000636012 IGLV10-54A0A075B6I4 117 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 RHODO00212 210 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 UBE2CO00762 179 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 TMEM14EPQ6UXP3 125 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 NEGR1Q7Z3B1 354 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 PDE6HQ13956 83 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 Q86TA4 180 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 HIST3H2BBQ8N257 126 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 REG4Q9BYZ8 158 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 TIRAPP58753 221 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
CACNA1A-221ENST00000636012 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 ETDCA0A1B0GVM5 59 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 TMEM190Q8WZ59 177 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 TSSC4Q9Y5U2 329 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 CCL24O00175 119 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 K7EMI3 77 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 NDUFC2O95298 119 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 MPZP25189 248 aa12.78□□□□□ -0.36
CACNA1A-221ENST00000636012 FAM120AOSQ5T036 256 aa12.77□□□□□ -0.36
CACNA1A-221ENST00000636012 LHFPL1Q86WI0 220 aa12.77□□□□□ -0.37
CACNA1A-221ENST00000636012 ANKRD29Q8N6D5 301 aa12.77□□□□□ -0.37
CACNA1A-221ENST00000636012 ESM1Q9NQ30 184 aa12.77□□□□□ -0.37
CACNA1A-221ENST00000636012 LOC105371267A0A1B0GV96 52 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 J3QLI3 93 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 DUX4L9Q6RFH8 374 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 IGKV3D-7A0A0C4DH55 119 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 NDUFB1O75438 58 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 FOXE3Q13461 319 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 DEFB136Q30KP8 78 aa12.76□□□□□ -0.37
CACNA1A-221ENST00000636012 CFHR4Q92496 578 aa12.75□□□□□ -0.37
CACNA1A-221ENST00000636012 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
CACNA1A-221ENST00000636012 TMEM14BQ9NUH8 114 aa12.75□□□□□ -0.37
CACNA1A-221ENST00000636012 POU2AF1Q16633 256 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms