RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ZNF674Q2M3X9 581 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 UQCC3Q6UW78 93 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 ZFAND2AQ8N6M9 145 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 LINC01587Q99440 93 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 TRAV12-3A0A0B4J271 114 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 SCO2A0A1W2PP80 73 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 A0A1W2PRE2 83 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 CXorf65A6NEN9 183 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 FAM74A7A6NL05 159 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 F8W036 122 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 H7BYZ3 331 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 J3KRW8 73 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
LINC00339-210ENST00000635675 ADCYAP1P18509 176 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 AZU1P20160 251 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 EMP1P54849 157 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 GNG5P63218 68 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 PMS2P11Q13670 270 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 GOLT1AQ6ZVE7 132 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 CYB561D1Q8N8Q1 229 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 Q8TAT8 98 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 LENEPQ9Y5L5 61 aa6.97□□□□□ -1.29
LINC00339-210ENST00000635675 PLAC8L1A1L4L8 177 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 TMEM218A2RU14 115 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 C7orf71A4D174 169 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 TCRAP04437 139 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 GPX1P07203 203 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.3
LINC00339-210ENST00000635675 C12orf74Q32Q52 190 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 PRR9Q5T870 116 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 CEMP1Q6PRD7 247 aaPredicted RBP6.96□□□□□ -1.3
LINC00339-210ENST00000635675 EIF4E3Q8N5X7 224 aaKnown RBP6.96□□□□□ -1.3
LINC00339-210ENST00000635675 PHLDA1Q8WV24 401 aaPredicted RBP6.96□□□□□ -1.3
LINC00339-210ENST00000635675 DKK2Q9UBU2 259 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 EPDR1Q9UM22 224 aa6.96□□□□□ -1.3
LINC00339-210ENST00000635675 TRAV8-1A0A0A6YYK1 113 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 SERTM2A0A1B0GWG4 89 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 NUPR2A6NF83 97 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 SPART-AS1P0CW21 52 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 HTN1P15515 57 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 MEF2BQ02080 365 aaPredicted RBP6.95□□□□□ -1.3
LINC00339-210ENST00000635675 BTN1A1Q13410 526 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 PYGO2Q9BRQ0 406 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 LINC00467Q9BRT7 94 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
LINC00339-210ENST00000635675 NKX6-2Q9C056 277 aaPredicted RBP6.95□□□□□ -1.3
LINC00339-210ENST00000635675 IGLV2-11P01706 119 aa6.94□□□□□ -1.3
LINC00339-210ENST00000635675 APOC3P02656 99 aa6.94□□□□□ -1.3
LINC00339-210ENST00000635675 S100A1P23297 94 aa6.94□□□□□ -1.3
LINC00339-210ENST00000635675 Q6ZQT7 251 aa6.94□□□□□ -1.3
LINC00339-210ENST00000635675 Q6ZTC4 211 aa6.94□□□□□ -1.3
LINC00339-210ENST00000635675 CCDC28AQ8IWP9 274 aa6.94□□□□□ -1.3
LINC00339-210ENST00000635675 RNASE8Q8TDE3 154 aaKnown RBP6.94□□□□□ -1.3
LINC00339-210ENST00000635675 TMEM263Q8WUH6 116 aaKnown RBP6.94□□□□□ -1.3
LINC00339-210ENST00000635675 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 LYRM9A8MSI8 78 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 F6UZH7 168 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 K7EQM0 130 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 TAGLN2P37802 199 aaKnown RBP6.93□□□□□ -1.3
LINC00339-210ENST00000635675 SOHLH1Q5JUK2 328 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 Q6AWC8 147 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 C16orf74Q96GX8 76 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 SGK494Q96LW2 274 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 ATG101Q9BSB4 218 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 DERL1Q9BUN8 251 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 ARL2-SNX15V9GYD0 113 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 FBLL1A6NHQ2 334 aaKnown RBP6.93□□□□□ -1.3
LINC00339-210ENST00000635675 ZNF727A8MUV8 499 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 KRBOX1C9JBD0 128 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 AKR1C3P42330 323 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 FLI1Q01543 452 aaPredicted RBP6.93□□□□□ -1.3
LINC00339-210ENST00000635675 ANXA2RQ3ZCQ2 193 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 HIST1H2BAQ96A08 127 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 LINC00479Q96M42 142 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 PARLQ9H300 379 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
LINC00339-210ENST00000635675 KLK5Q9Y337 293 aaPredicted RBP6.93□□□□□ -1.3
LINC00339-210ENST00000635675 TIMM8BQ9Y5J9 83 aaPredicted RBP6.93□□□□□ -1.3
LINC00339-210ENST00000635675 IGHV1OR15-1A0A075B7D0 117 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 TRAV10A0A0B4J240 114 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 M0R036 132 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 PEX7O00628 323 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 PDE6DO43924 150 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 SCO1O75880 301 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 C11orf72Q8NBR9 251 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 C2CD4CQ8TF44 421 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 TCEAL7Q9BRU2 100 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 SEC11CQ9BY50 192 aa6.92□□□□□ -1.3
LINC00339-210ENST00000635675 NOP10Q9NPE3 64 aaKnown RBP6.92□□□□□ -1.3
LINC00339-210ENST00000635675 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms