RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 C15orf53Q8NAA6 179 aa11.08□□□□□ -0.64
LINC00339-207ENST00000634712 GSN-AS1Q9NRJ2 163 aa11.08□□□□□ -0.64
LINC00339-207ENST00000634712 CTXND1A0A1B0GTU2 59 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 SERTM2A0A1B0GWG4 89 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 GNG5P63218 68 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 C5orf17Q8NAS9 161 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 SUN5Q8TC36 379 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
LINC00339-207ENST00000634712 A0A0D9SG52 128 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
LINC00339-207ENST00000634712 OR5I1Q13606 314 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 ZNF345Q14585 488 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 NDFIP1Q9BT67 221 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 KMT2AQ03164 3969 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 VPS13DQ5THJ4 4388 aa11.06□□□□□ -0.64
LINC00339-207ENST00000634712 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 NUDT3O95989 172 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 IBA57Q5T440 356 aaKnown RBP11.05□□□□□ -0.64
LINC00339-207ENST00000634712 FAM159AQ6UWV7 190 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 Q6ZQT7 251 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 SSX7Q7RTT5 188 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 LINC00612Q8N6U2 182 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 TREM1Q9NP99 234 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
LINC00339-207ENST00000634712 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 TCRAP04437 139 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 TCL1AP56279 114 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 Q6AWC8 147 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 Q6ZTI0 123 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 OR11H4Q8NGC9 324 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 EPDR1Q9UM22 224 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 KLF12Q9Y4X4 402 aa11.04□□□□□ -0.64
LINC00339-207ENST00000634712 A0A1W2PRE2 83 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 FGF8P55075 233 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-207ENST00000634712 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 STOML3Q8TAV4 291 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 SGK494Q96LW2 274 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 ATG101Q9BSB4 218 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 ZNF471Q9BX82 626 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-207ENST00000634712 NAGKQ9UJ70 344 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 PFDN1O60925 122 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 IFNA7P01567 189 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 UBE2G2P60604 165 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 EIF5AP63241 154 aaKnown RBP11.03□□□□□ -0.64
LINC00339-207ENST00000634712 RNF212Q495C1 297 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
LINC00339-207ENST00000634712 MAP1LC3B2A6NCE7 125 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 GGTLC3B5MD39 225 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 F6UZH7 168 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 BCL2L11O43521 198 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 SPINK4O60575 86 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 CYB561D1Q8N8Q1 229 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 NKX6-2Q9C056 277 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-207ENST00000634712 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 PSG8Q9UQ74 426 aa11.02□□□□□ -0.65
LINC00339-207ENST00000634712 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 A0A0J9YY99 117 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 FBLL1A6NHQ2 334 aaKnown RBP11.01□□□□□ -0.65
LINC00339-207ENST00000634712 SEC11BP0C7V7 166 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 FLI1Q01543 452 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-207ENST00000634712 LGALS9BQ3B8N2 356 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 PRNTQ86SH4 94 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 TVP23CQ96ET8 276 aa11.01□□□□□ -0.65
LINC00339-207ENST00000634712 UMAD1C9J7I0 102 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 PPT1P50897 306 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 CCL18P55774 89 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 TMUB2Q71RG4 321 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 TMEM75Q8N9X5 138 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 KCNS1Q96KK3 526 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 C18orf15Q96N68 181 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 SPXQ9BT56 116 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
LINC00339-207ENST00000634712 MDFICQ9P1T7 246 aa11□□□□□ -0.65
LINC00339-207ENST00000634712 M0R2N4 97 aa10.99□□□□□ -0.65
LINC00339-207ENST00000634712 HOXA5P20719 270 aa10.99□□□□□ -0.65
LINC00339-207ENST00000634712 SMUG1Q53HV7 270 aa10.99□□□□□ -0.65
LINC00339-207ENST00000634712 SAPCD1Q5SSQ6 148 aa10.99□□□□□ -0.65
LINC00339-207ENST00000634712 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
LINC00339-207ENST00000634712 FAM74A7A6NL05 159 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 GNRH2O43555 120 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 TPT1P13693 172 aaKnown RBP10.98□□□□□ -0.65
LINC00339-207ENST00000634712 FHITP49789 147 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-207ENST00000634712 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 FAM213BQ8TBF2 198 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 SFT2D1Q8WV19 159 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 HIST1H2BAQ96A08 127 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms