RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 CMTM2Q8TAZ6 248 aa11.98□□□□□ -0.49
SPTAN1-214ENST00000628614 ASB13Q8WXK3 278 aa11.98□□□□□ -0.49
SPTAN1-214ENST00000628614 HYLS1Q96M11 299 aa11.98□□□□□ -0.49
SPTAN1-214ENST00000628614 AQP10Q96PS8 301 aa11.98□□□□□ -0.49
SPTAN1-214ENST00000628614 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
SPTAN1-214ENST00000628614 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
SPTAN1-214ENST00000628614 SPINK4O60575 86 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 ARL6IP6Q8N6S5 226 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 OR10G4Q8NGN3 311 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 TMED6Q8WW62 240 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 TP53TG3Q9ULZ0 132 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 DNAH11Q96DT5 4516 aa11.97□□□□□ -0.49
SPTAN1-214ENST00000628614 NBDYA0A0U1RRE5 68 aa11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 PGPA6NDG6 321 aa11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 GIPP09681 153 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 ZNF415Q09FC8 603 aa11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 Q6ZQT7 251 aa11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 OR2G3Q8NGZ4 309 aa11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 PSMG3Q9BT73 122 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-214ENST00000628614 DYNC1H1Q14204 4646 aaKnown RBP11.96□□□□□ -0.5
SPTAN1-214ENST00000628614 CDC34P49427 236 aaPredicted RBP11.95□□□□□ -0.5
SPTAN1-214ENST00000628614 Q6AWC8 147 aa11.95□□□□□ -0.5
SPTAN1-214ENST00000628614 HSD17B11Q8NBQ5 300 aa11.95□□□□□ -0.5
SPTAN1-214ENST00000628614 RPH3ALQ9UNE2 315 aa11.95□□□□□ -0.5
SPTAN1-214ENST00000628614 HERC2O95714 4834 aa11.94□□□□□ -0.5
SPTAN1-214ENST00000628614 MBP02144 154 aa11.94□□□□□ -0.5
SPTAN1-214ENST00000628614 ST6GAL2Q96JF0 529 aa11.94□□□□□ -0.5
SPTAN1-214ENST00000628614 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 STAG3L2P0CL84 134 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 STAG3L3P0CL85 134 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 SERF2P84101 59 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 MUC21Q5SSG8 566 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 FAM159AQ6UWV7 190 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 GOLT1AQ6ZVE7 132 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 INO80EQ8NBZ0 244 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 VSIG2Q96IQ7 327 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 Q9H8V8 135 aa11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 MRPL16Q9NX20 251 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-214ENST00000628614 TRGV11A0A075B6L2 103 aa11.92□□□□□ -0.5
SPTAN1-214ENST00000628614 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
SPTAN1-214ENST00000628614 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
SPTAN1-214ENST00000628614 SERTM2A0A1B0GWG4 89 aa11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 SLAQ13239 276 aa11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 ESRGQ1W209 222 aa11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 Q5BKY6 102 aa11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 SPXQ9BT56 116 aa11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 MRPS16Q9Y3D3 137 aaKnown RBP11.91□□□□□ -0.5
SPTAN1-214ENST00000628614 FXYD6-FXYD2A0A087WZ82 144 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 A0A096LPF7 62 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 PAX4O43316 350 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 TDRG1Q3Y452 100 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 TMEM183AQ8IXX5 376 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 NAGKQ9UJ70 344 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 TNFSF18Q9UNG2 199 aa11.9□□□□□ -0.5
SPTAN1-214ENST00000628614 TRAV8-1A0A0A6YYK1 113 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 GCHFRP30047 84 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 GNG5P63218 68 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 SUN5Q8TC36 379 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 NDFIP1Q9BT67 221 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 SH3BGRL3Q9H299 93 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 TREM1Q9NP99 234 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 ICOSQ9Y6W8 199 aa11.89□□□□□ -0.51
SPTAN1-214ENST00000628614 BORCS7-ASMTA0A0B4J1R7 106 aa11.88□□□□□ -0.51
SPTAN1-214ENST00000628614 K7EQM0 130 aa11.88□□□□□ -0.51
SPTAN1-214ENST00000628614 CXorf1O96002 111 aa11.88□□□□□ -0.51
SPTAN1-214ENST00000628614 RGS21Q2M5E4 152 aa11.88□□□□□ -0.51
SPTAN1-214ENST00000628614 OR2T35Q8NGX2 323 aa11.88□□□□□ -0.51
SPTAN1-214ENST00000628614 A0A1W2PPQ1 181 aa11.87□□□□□ -0.51
SPTAN1-214ENST00000628614 F6UZH7 168 aa11.87□□□□□ -0.51
SPTAN1-214ENST00000628614 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-214ENST00000628614 RASL10AQ92737 203 aa11.87□□□□□ -0.51
SPTAN1-214ENST00000628614 TVP23CQ96ET8 276 aa11.87□□□□□ -0.51
SPTAN1-214ENST00000628614 HHLA3Q9XRX5 114 aa11.87□□□□□ -0.51
SPTAN1-214ENST00000628614 MUC4Q99102 2169 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 TCRAP04437 139 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 CRYBA4P53673 196 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 FHL2Q14192 279 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 KCNS1Q96KK3 526 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
SPTAN1-214ENST00000628614 TNP2Q05952 138 aa11.85□□□□□ -0.51
SPTAN1-214ENST00000628614 MRPL23Q16540 153 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms