RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 ENKURQ8TC29 256 aa8.56□□□□□ -1.04
SOX2-OT-247ENST00000628347 PHYHIPLQ96FC7 376 aa8.56□□□□□ -1.04
SOX2-OT-247ENST00000628347 TP53TG3Q9ULZ0 132 aa8.56□□□□□ -1.04
SOX2-OT-247ENST00000628347 ICOSQ9Y6W8 199 aa8.56□□□□□ -1.04
SOX2-OT-247ENST00000628347 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 SIVA1O15304 175 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 PAX4O43316 350 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 UPK1BO75841 260 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 ZNF266Q14584 549 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 ARPC5LQ9BPX5 153 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 PRO0255Q9UI72 69 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
SOX2-OT-247ENST00000628347 OR10J4P0C629 311 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 CSN1S1P47710 185 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 CRYBA4P53673 196 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 LINC00315P59091 139 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 ZNF415Q09FC8 603 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 FHL2Q14192 279 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 LRRC37A5PQ49AS3 106 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 Q6ZQT7 251 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 ATP5SQ99766 215 aa8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
SOX2-OT-247ENST00000628347 FAT1Q14517 4588 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 DNAH8Q96JB1 4490 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 INMT-MINDY4F8WBC2 141 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 OR7C2O60412 319 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 NXPH4O95158 308 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 Q6AWC8 147 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 Q8N1X5 172 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 Q8TAT8 98 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 PPP1R1CQ8WVI7 109 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 TMED6Q8WW62 240 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 HSPB11Q9Y547 144 aa8.53□□□□□ -1.04
SOX2-OT-247ENST00000628347 IGHV3-53P01767 116 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 H2BFSP57053 126 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 RANP62826 216 aaKnown RBP8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 UBE2L3P68036 154 aaKnown RBP8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 IFITM3Q01628 133 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 MRPL23Q16540 153 aaKnown RBP8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 KHDC3LQ587J8 217 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 IQCF2Q8IXL9 164 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 OR10G4Q8NGN3 311 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 MARVELD1Q9BSK0 173 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 SPXQ9BT56 116 aa8.52□□□□□ -1.05
SOX2-OT-247ENST00000628347 DIRC3C9JPN6 131 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 MPC2O95563 127 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 PET100P0DJ07 73 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 TAS2R45P59539 299 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 FFAR4Q5NUL3 377 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 ARL6IP6Q8N6S5 226 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 RASL10AQ92737 203 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 C8orf49Q96NF6 230 aa8.51□□□□□ -1.05
SOX2-OT-247ENST00000628347 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 K7EP13 123 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 IFNA5P01569 189 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 TDRG1Q3Y452 100 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 MUC21Q5SSG8 566 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 NEGR1Q7Z3B1 354 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 OTORQ9NRC9 128 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
SOX2-OT-247ENST00000628347 TRGV4A0A0C4DH28 118 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 K7EQD1 137 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 RPL12P30050 165 aaKnown RBP8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 FAM159AQ6UWV7 190 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 SCGB1C1Q8TD33 95 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 ZNF479Q96JC4 524 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
SOX2-OT-247ENST00000628347 TRAV4A0A0B4J268 109 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 EREGO14944 169 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 ORM1P02763 201 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 SRIP30626 198 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 ERVFC1-1P60608 527 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 TMEM183BQ1AE95 376 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 FAM74A1Q5RGS3 127 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 CDPF1Q6NVV7 123 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 PQLC2Q6ZP29 291 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 SCRT2Q9NQ03 307 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 PTTG2Q9NZH5 202 aa8.48□□□□□ -1.05
SOX2-OT-247ENST00000628347 TRAV9-2A0A087WT02 112 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 PGPA6NDG6 321 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 A6NHS1 94 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 SSNA1O43805 119 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 ACOT6Q3I5F7 207 aaPredicted RBP8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 CMTM2Q8TAZ6 248 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 PCNPQ8WW12 178 aaKnown RBP8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 MBD2Q9UBB5 411 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 LY96Q9Y6Y9 160 aa8.47□□□□□ -1.05
SOX2-OT-247ENST00000628347 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.06
SOX2-OT-247ENST00000628347 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.06
SOX2-OT-247ENST00000628347 M0R2P5 195 aa8.46□□□□□ -1.06
SOX2-OT-247ENST00000628347 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms