RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 PLXNA4Q9HCM2 1894 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 NPYP01303 97 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 POU2AF1Q16633 256 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 A0A096LPF7 62 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 IGHV2-70P01814 119 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 DEFB112Q30KQ8 113 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 VWC2Q2TAL6 325 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 C20orf144Q9BQM9 153 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 H3BUA1 57 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 EREGO14944 169 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 IGHV4-59P01825 116 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 TCF15Q12870 199 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 ATP6V0BQ99437 205 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
SCN8A-209ENST00000627620 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 WIPF3A6NGB9 483 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 C8orf31Q8N9H6 132 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 TMEM126AQ9H061 195 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 WT1P19544 449 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-209ENST00000627620 PRR20EP86478 221 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 PRR20CP86479 221 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 PRR20DP86480 221 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 PRR20BP86481 221 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 PRR20AP86496 221 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 C11orf53Q8IXP5 236 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 VPREB3Q9UKI3 123 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 WDR81Q562E7 1941 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 RPL32P62910 135 aaKnown RBP10.11□□□□□ -0.79
SCN8A-209ENST00000627620 C11orf52Q96A22 123 aa10.11□□□□□ -0.79
SCN8A-209ENST00000627620 MRPL35Q9NZE8 188 aaKnown RBP10.11□□□□□ -0.79
SCN8A-209ENST00000627620 MGAMO43451 1857 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 IGLC7A0M8Q6 106 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 F6UB75 175 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 HLA-DMBP28068 263 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 EDA2RQ9HAV5 297 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 HEATR5AQ86XA9 2040 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 SOCS3O14543 225 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 Q6ZWC4 215 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 CREBBPQ92793 2442 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 MRPL53Q96EL3 112 aaKnown RBP10.1□□□□□ -0.79
SCN8A-209ENST00000627620 KIAA1671Q9BY89 1806 aa10.1□□□□□ -0.79
SCN8A-209ENST00000627620 LTAP01374 205 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 PYGO2Q9BRQ0 406 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 ANGP03950 147 aaKnown RBP10.09□□□□□ -0.79
SCN8A-209ENST00000627620 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-209ENST00000627620 DYNAPQ8N1N2 210 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 TSC2P49815 1807 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 H3BMM0 161 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 SRSF2Q01130 221 aaKnown RBP10.09□□□□□ -0.79
SCN8A-209ENST00000627620 KLF5Q13887 457 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-209ENST00000627620 SPRNQ5BIV9 151 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 UBE2WQ96B02 151 aa10.09□□□□□ -0.79
SCN8A-209ENST00000627620 TSSC4Q9Y5U2 329 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-209ENST00000627620 PRSS29PA6NIE9 313 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 SPINK8P0C7L1 97 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 CGB3P0DN86 165 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 OR11H6Q8NGC7 330 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 C20orf78Q9BR46 151 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
SCN8A-209ENST00000627620 HELZP42694 1942 aaKnown RBP10.08□□□□□ -0.8
SCN8A-209ENST00000627620 NDUFS6O75380 124 aaKnown RBP10.08□□□□□ -0.8
SCN8A-209ENST00000627620 RMI2Q96E14 147 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 GNRH2O43555 120 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
SCN8A-209ENST00000627620 IGLC2P0DOY2 106 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 HERVK_113P63121 156 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 IGFBPL1Q8WX77 278 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 PCNX1Q96RV3 2341 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 TRBV20-1A0A075B6N2 111 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 F8VRH5 84 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 INAFM2P0DMQ5 153 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 MORN5Q5VZ52 161 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 CLPSL2Q6UWE3 100 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 Q8NFD4 153 aa10.08□□□□□ -0.8
SCN8A-209ENST00000627620 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
SCN8A-209ENST00000627620 CENPVL3A0A0U1RRI6 287 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 COX8AP10176 69 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 DEFB136Q30KP8 78 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 MYLKQ15746 1914 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 CCL24O00175 119 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 IGLL1P15814 213 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
SCN8A-209ENST00000627620 K7EN84 100 aa10.06□□□□□ -0.8
SCN8A-209ENST00000627620 FOXE3Q13461 319 aa10.06□□□□□ -0.8
SCN8A-209ENST00000627620 NLRC5Q86WI3 1866 aa10.06□□□□□ -0.8
SCN8A-209ENST00000627620 IGHV4-61A0A0C4DH41 118 aa10.06□□□□□ -0.8
SCN8A-209ENST00000627620 FGF6P10767 208 aa10.06□□□□□ -0.8
SCN8A-209ENST00000627620 IGFL2Q6UWQ7 119 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms