RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CD14P08571 375 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 HTN3P15516 51 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 S100A3P33764 101 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 RCVRNP35243 200 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 CDKN2CP42773 168 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 HAAOP46952 286 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 GNG10P50151 68 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 TSPEAR-AS2P59090 65 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 CDC42P60953 191 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 RPL37AP61513 92 aaKnown RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 EMX2Q04743 252 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 MED21Q13503 144 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 BSXQ3C1V8 233 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 ACOT6Q3I5F7 207 aaPredicted RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 MESTQ5EB52 335 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 CENPWQ5EE01 88 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 DNM1P34Q6PK57 102 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 LINC00311Q8N616 119 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 ZNF565Q8N9K5 539 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 PFN4Q8NHR9 129 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 LHFPL5Q8TAF8 219 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 SPACA4Q8TDM5 124 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 LEAP2Q969E1 77 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 TESCQ96BS2 214 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 LINC01600Q96MT4 127 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 TBX5Q99593 518 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 FAM103A1Q9BTL3 118 aaKnown RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 CHST6Q9GZX3 395 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 PBOV1Q9GZY1 135 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 C11orf1Q9H5F2 150 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 NMNAT1Q9HAN9 279 aaPredicted RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 TPT1P8Q9HAU6 139 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 TMEM14BQ9NUH8 114 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 IDI2-AS1Q9NZ38 188 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 MRPL27Q9P0M9 148 aaKnown RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 RBMX2Q9Y388 322 aaKnown RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 MRPS16Q9Y3D3 137 aaKnown RBP0.73□□□□□ -2.29
VBP1-204ENST00000625964 DNAJC15Q9Y5T4 150 aa0.73□□□□□ -2.29
VBP1-204ENST00000625964 A0A087WUU8 490 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 RAB19A4D1S5 217 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 GRIFINA4D1Z8 144 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 TMEM235A6NFC5 223 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SMIM9A6NGZ8 99 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SMIM23A6NLE4 172 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 PPP5D1E7EU14 171 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 CSN2P05814 226 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 ORM2P19652 201 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 GADD45AP24522 165 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 MAGEA2P43356 314 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SERPINB9P50453 376 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 ZNF137PP52743 207 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 EMP1P54849 157 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 DNAJB13P59910 316 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 ERHP84090 104 aaKnown RBP0.72□□□□□ -2.29
VBP1-204ENST00000625964 CDK6Q00534 326 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 DEFA5Q01523 94 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 ZNF90Q03938 601 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 FADDQ13158 208 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 KRR1Q13601 381 aaKnown RBP0.72□□□□□ -2.29
VBP1-204ENST00000625964 FXYD3Q14802 87 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SPCS2Q15005 226 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 LTC4SQ16873 150 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 ESRGQ1W209 222 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 Q3ZCU0 254 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 AHSA2Q719I0 299 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 DCXRQ7Z4W1 244 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 OR4D11Q8NGI4 311 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 TMEM239Q8WW34 195 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SLAMF6Q96DU3 332 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 CEP19Q96LK0 163 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 RETNLBQ9BQ08 111 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 NSRP1Q9H0G5 558 aaKnown RBP0.72□□□□□ -2.29
VBP1-204ENST00000625964 SLC2A9Q9NRM0 540 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 BABAM2Q9NXR7 383 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SNX12Q9UMY4 172 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 SNX24Q9Y343 169 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 MED31Q9Y3C7 131 aa0.72□□□□□ -2.29
VBP1-204ENST00000625964 TRAV27A0A087WT01 109 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 MEIKINA0A087WXM9 373 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 A0A1B0GW15 77 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 PQLC2LA1A4F0 135 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 LINC00862A6NCI5 91 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 FAM223BA6NKX1 122 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 A8MUN3 132 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 EFCAB9A8MZ26 197 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 F5H768 121 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 K7EP13 123 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 M0QX08 132 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 PGRMC1O00264 195 aaKnown RBP0.71□□□□□ -2.3
VBP1-204ENST00000625964 SLC22A1O15245 554 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 CRXO43186 299 aaPredicted RBP0.71□□□□□ -2.3
VBP1-204ENST00000625964 FADS2O95864 444 aaKnown RBP0.71□□□□□ -2.3
VBP1-204ENST00000625964 OR2H2O95918 312 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 CTSDP07339 412 aaPredicted RBP0.71□□□□□ -2.3
VBP1-204ENST00000625964 ZNF705DP0CH99 300 aaPredicted RBP0.71□□□□□ -2.3
VBP1-204ENST00000625964 ZNF705BP0CI00 300 aaPredicted RBP0.71□□□□□ -2.3
VBP1-204ENST00000625964 CRHBPP24387 322 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 PSMB6P28072 239 aa0.71□□□□□ -2.3
VBP1-204ENST00000625964 HSD11B1P28845 292 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms