RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 MBP02144 154 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 ARL14EPLP0DKL9 152 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 HOXA5P20719 270 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 ATP6V0CP27449 155 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 SERF2P84101 59 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 OR5I1Q13606 314 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
LINC00643-205ENST00000623219 GNPNAT1Q96EK6 184 aaPredicted RBP10.35□□□□□ -0.75
LINC00643-205ENST00000623219 HYLS1Q96M11 299 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
LINC00643-205ENST00000623219 PKD1P98161 4303 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 PGPA6NDG6 321 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 H3BNG1 76 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
LINC00643-205ENST00000623219 SPINK4O60575 86 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 CCL18P55774 89 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 ZNF415Q09FC8 603 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 Q5BKY6 102 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 Q6AWC8 147 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
LINC00643-205ENST00000623219 FXYD6-FXYD2A0A087WZ82 144 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 RTL8CO15255 209 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 Q6ZQT7 251 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 OR2T35Q8NGX2 323 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 SH3BGRL3Q9H299 93 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 TNFSF18Q9UNG2 199 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.76
LINC00643-205ENST00000623219 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
LINC00643-205ENST00000623219 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
LINC00643-205ENST00000623219 SUN5Q8TC36 379 aa10.32□□□□□ -0.76
LINC00643-205ENST00000623219 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
LINC00643-205ENST00000623219 ST6GAL2Q96JF0 529 aa10.32□□□□□ -0.76
LINC00643-205ENST00000623219 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
LINC00643-205ENST00000623219 BORCS7-ASMTA0A0B4J1R7 106 aa10.31□□□□□ -0.76
LINC00643-205ENST00000623219 A0A0J9YY99 117 aa10.31□□□□□ -0.76
LINC00643-205ENST00000623219 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
LINC00643-205ENST00000623219 PRSS29PA6NIE9 313 aa10.31□□□□□ -0.76
LINC00643-205ENST00000623219 GCHFRP30047 84 aa10.31□□□□□ -0.76
LINC00643-205ENST00000623219 SOHLH1Q5JUK2 328 aa10.31□□□□□ -0.76
LINC00643-205ENST00000623219 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 CXorf1O96002 111 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 GNG5P63218 68 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 RPL7L1Q6DKI1 246 aaKnown RBP10.3□□□□□ -0.76
LINC00643-205ENST00000623219 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
LINC00643-205ENST00000623219 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
LINC00643-205ENST00000623219 MRPL16Q9NX20 251 aaKnown RBP10.3□□□□□ -0.76
LINC00643-205ENST00000623219 TRAV8-1A0A0A6YYK1 113 aa10.29□□□□□ -0.76
LINC00643-205ENST00000623219 NBDYA0A0U1RRE5 68 aa10.29□□□□□ -0.76
LINC00643-205ENST00000623219 A0A1B0GVY2 172 aa10.29□□□□□ -0.76
LINC00643-205ENST00000623219 G3V3Q6 166 aa10.29□□□□□ -0.76
LINC00643-205ENST00000623219 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
LINC00643-205ENST00000623219 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
LINC00643-205ENST00000623219 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 F6UZH7 168 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 K7EQM0 130 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 NDFIP1Q9BT67 221 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 TREM1Q9NP99 234 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
LINC00643-205ENST00000623219 A0A096LPF7 62 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 GGTLC3B5MD39 225 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 TAAR5O14804 337 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 TCRAP04437 139 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 TVP23CQ96ET8 276 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 SPXQ9BT56 116 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
LINC00643-205ENST00000623219 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
LINC00643-205ENST00000623219 ARPC5O15511 151 aa10.26□□□□□ -0.77
LINC00643-205ENST00000623219 SLAQ13239 276 aa10.26□□□□□ -0.77
LINC00643-205ENST00000623219 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
LINC00643-205ENST00000623219 MRPS16Q9Y3D3 137 aaKnown RBP10.26□□□□□ -0.77
LINC00643-205ENST00000623219 HERC2O95714 4834 aa10.26□□□□□ -0.77
LINC00643-205ENST00000623219 FBLL1A6NHQ2 334 aaKnown RBP10.25□□□□□ -0.77
LINC00643-205ENST00000623219 PAX4O43316 350 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 ZNF726P1Q15940 193 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 ESRGQ1W209 222 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 TTC32Q5I0X7 151 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 IQCF2Q8IXL9 164 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 CYB561D1Q8N8Q1 229 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 TMEM75Q8N9X5 138 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 RASL10AQ92737 203 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 KCNS1Q96KK3 526 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 Q9H8V8 135 aa10.25□□□□□ -0.77
LINC00643-205ENST00000623219 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms