RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 Q5PR19 223 aa10.92□□□□□ -0.66
LDB3-209ENST00000623056 NBR2O15453 112 aa10.92□□□□□ -0.66
LDB3-209ENST00000623056 IGHV3-23P01764 117 aa10.92□□□□□ -0.66
LDB3-209ENST00000623056 PLNP26678 52 aa10.92□□□□□ -0.66
LDB3-209ENST00000623056 DYNAPQ8N1N2 210 aa10.92□□□□□ -0.66
LDB3-209ENST00000623056 ZNF48Q96MX3 618 aaPredicted RBP10.92□□□□□ -0.66
LDB3-209ENST00000623056 NRACQ8N912 160 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 IGFBPL1Q8WX77 278 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 CFHR4Q92496 578 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 TPRP12270 2363 aaKnown RBP10.91□□□□□ -0.66
LDB3-209ENST00000623056 BSNQ9UPA5 3926 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 TRAV26-2A0A0B4J265 109 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 EFNA4P52798 201 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 C20orf78Q9BR46 151 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 C21orf62Q9NYP8 219 aa10.91□□□□□ -0.66
LDB3-209ENST00000623056 CEP295Q9C0D2 2601 aa10.9□□□□□ -0.66
LDB3-209ENST00000623056 ANKRD11Q6UB99 2663 aaPredicted RBP10.9□□□□□ -0.66
LDB3-209ENST00000623056 PRAC2D3DTV9 90 aa10.9□□□□□ -0.66
LDB3-209ENST00000623056 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.66
LDB3-209ENST00000623056 PRSS47A8MTI9 375 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 LINC01619G3V211 115 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 APOMO95445 188 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 FOXC1Q12948 553 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 LCNL1Q6ZST4 164 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 IL17RELQ6ZVW7 336 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 MRAP2Q96G30 205 aa10.9□□□□□ -0.67
LDB3-209ENST00000623056 IGKV3D-20A0A0C4DH25 116 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 MYMXA0A1B0GTQ4 84 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 ZNF672Q499Z4 452 aaPredicted RBP10.89□□□□□ -0.67
LDB3-209ENST00000623056 APC2O95996 2303 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 IGHV3OR16-8A0A075B7F1 116 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 SCGB2A2Q13296 93 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 FAM57AQ8TBR7 257 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 C11orf21Q9P2W6 132 aa10.89□□□□□ -0.67
LDB3-209ENST00000623056 MAP1BP46821 2468 aaKnown RBP10.88□□□□□ -0.67
LDB3-209ENST00000623056 TACC2O95359 2948 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 A0A0G2JNJ9 132 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 LYNX1G3V0Z9 82 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 H7C1H1 209 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 HOXA3O43365 443 aaPredicted RBP10.88□□□□□ -0.67
LDB3-209ENST00000623056 LYNX1P0DP58 116 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 FOXI1Q12951 378 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 NPBQ8NG41 125 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 C1QTNF4Q9BXJ3 329 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 Q9UFV3 132 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
LDB3-209ENST00000623056 TRAV26-1A0A087WT03 109 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 F8VRH5 84 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 RNF182Q8N6D2 247 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 UFC1Q9Y3C8 167 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 CACNA1AO00555 2505 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 TRAV12-1A0A0B4J245 112 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 E7EQL1 145 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 CTSGP08311 255 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 SMCPP49901 116 aaPredicted RBP10.87□□□□□ -0.67
LDB3-209ENST00000623056 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 SYT8Q8NBV8 401 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 MRPL16Q9NX20 251 aaKnown RBP10.87□□□□□ -0.67
LDB3-209ENST00000623056 ONECUT1Q9UBC0 465 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 ADGRG4Q8IZF6 3080 aa10.87□□□□□ -0.67
LDB3-209ENST00000623056 C5orf64Q2M2E5 130 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 IGFL3Q6UXB1 125 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 Q6ZS92 163 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 IGHV3-35A0A0C4DH35 117 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 LGALS1P09382 135 aaKnown RBP10.86□□□□□ -0.67
LDB3-209ENST00000623056 NDPQ00604 133 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 C8orf86Q6ZUL3 223 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
LDB3-209ENST00000623056 PCNX1Q96RV3 2341 aa10.86□□□□□ -0.67
LDB3-209ENST00000623056 CSMD1Q96PZ7 3565 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 HES1Q14469 280 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 NFE4Q86UQ8 179 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 CRYBA4P53673 196 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 KLRD1Q13241 179 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
LDB3-209ENST00000623056 PIEZO2Q9H5I5 2752 aa10.85□□□□□ -0.67
LDB3-209ENST00000623056 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
LDB3-209ENST00000623056 ACACAQ13085 2346 aa10.84□□□□□ -0.67
LDB3-209ENST00000623056 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
LDB3-209ENST00000623056 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
LDB3-209ENST00000623056 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
LDB3-209ENST00000623056 KLK15Q9H2R5 256 aa10.84□□□□□ -0.67
LDB3-209ENST00000623056 LINC01549A6NIU2 74 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 SCGB2A1O75556 95 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 SPINK8P0C7L1 97 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 FHL3Q13643 280 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 SPANXN1Q5VSR9 72 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 ZNF418Q8TF45 676 aaPredicted RBP10.83□□□□□ -0.68
LDB3-209ENST00000623056 SCGB3A1Q96QR1 104 aa10.83□□□□□ -0.68
LDB3-209ENST00000623056 RAXQ9Y2V3 346 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms