RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 XKRY2A2RUG3 117 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 C5orf52A6NGY3 159 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 ZNF688P0C7X2 276 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 SNRPD3P62318 126 aaKnown RBP16.14■□□□□ 0.17
SPAST-204ENST00000621856 LENEPQ9Y5L5 61 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 MT-ND6P03923 174 aa16.13■□□□□ 0.17
SPAST-204ENST00000621856 CSN3P07498 182 aa16.13■□□□□ 0.17
SPAST-204ENST00000621856 FHL3Q13643 280 aa16.13■□□□□ 0.17
SPAST-204ENST00000621856 RASL11AQ6T310 242 aa16.13■□□□□ 0.17
SPAST-204ENST00000621856 TMEM136Q6ZRR5 245 aa16.13■□□□□ 0.17
SPAST-204ENST00000621856 ATP5L2Q7Z4Y8 100 aa16.13■□□□□ 0.17
SPAST-204ENST00000621856 PSMG4Q5JS54 123 aa16.12■□□□□ 0.17
SPAST-204ENST00000621856 RPS20P60866 119 aaKnown RBP16.11■□□□□ 0.17
SPAST-204ENST00000621856 CUBNO60494 3623 aa16.11■□□□□ 0.17
SPAST-204ENST00000621856 HLA-DQA1P01909 254 aa16.11■□□□□ 0.17
SPAST-204ENST00000621856 ORM1P02763 201 aa16.11■□□□□ 0.17
SPAST-204ENST00000621856 HIVEP1P15822 2718 aa16.11■□□□□ 0.17
SPAST-204ENST00000621856 CAMPP49913 170 aa16.1■□□□□ 0.17
SPAST-204ENST00000621856 J3KRW8 73 aa16.09■□□□□ 0.17
SPAST-204ENST00000621856 FOXA3P55318 350 aaPredicted RBP16.09■□□□□ 0.17
SPAST-204ENST00000621856 HBBP68871 147 aa16.09■□□□□ 0.17
SPAST-204ENST00000621856 Q6AWC8 147 aa16.09■□□□□ 0.17
SPAST-204ENST00000621856 TPPP3Q9BW30 176 aa16.09■□□□□ 0.17
SPAST-204ENST00000621856 A0A1B0GXF2 115 aa16.08■□□□□ 0.17
SPAST-204ENST00000621856 UBE2CO00762 179 aa16.08■□□□□ 0.17
SPAST-204ENST00000621856 NSUN5P1Q3KNT7 163 aa16.08■□□□□ 0.17
SPAST-204ENST00000621856 BORCS7Q96B45 105 aa16.08■□□□□ 0.16
SPAST-204ENST00000621856 NSD1Q96L73 2696 aaPredicted RBP16.07■□□□□ 0.16
SPAST-204ENST00000621856 TMEM61Q8N0U2 210 aa16.07■□□□□ 0.16
SPAST-204ENST00000621856 FN1P02751 2386 aaKnown RBP16.07■□□□□ 0.16
SPAST-204ENST00000621856 A0A1B0GUT8 65 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 APCSP02743 223 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 CD33P20138 364 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 DEFB114Q30KQ6 69 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 LINC01559Q495D7 138 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 PRR9Q5T870 116 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 GDF5OSQ5U4N7 250 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 ZFAND2AQ8N6M9 145 aa16.06■□□□□ 0.16
SPAST-204ENST00000621856 HOXA5P20719 270 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 RIGQ13278 110 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 EBLN2Q6P2I7 272 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 FAM19A4Q96LR4 140 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 TRAV2A0A0B4J234 112 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 TRBV7-9A0A0J9YWB2 115 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 GPX1P07203 203 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 ARMS2P0C7Q2 107 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 AKR1D1P51857 326 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 LYZL1Q6UWQ5 148 aa16.05■□□□□ 0.16
SPAST-204ENST00000621856 A0A0J9YX75 114 aa16.04■□□□□ 0.16
SPAST-204ENST00000621856 GRIFINA4D1Z8 144 aa16.04■□□□□ 0.16
SPAST-204ENST00000621856 ADARB2-AS1A8MUL3 147 aa16.04■□□□□ 0.16
SPAST-204ENST00000621856 KIAA1644Q3SXP7 199 aa16.04■□□□□ 0.16
SPAST-204ENST00000621856 FER1L6-AS1Q8NA97 138 aa16.04■□□□□ 0.16
SPAST-204ENST00000621856 FLNBO75369 2602 aaKnown RBP16.03■□□□□ 0.16
SPAST-204ENST00000621856 CRISP2P16562 243 aa16.03■□□□□ 0.16
SPAST-204ENST00000621856 KRTAP10-3P60369 221 aa16.03■□□□□ 0.16
SPAST-204ENST00000621856 CD300EQ496F6 205 aaPredicted RBP16.03■□□□□ 0.16
SPAST-204ENST00000621856 SSBP4Q9BWG4 385 aaPredicted RBP16.03■□□□□ 0.16
SPAST-204ENST00000621856 C11orf21Q9P2W6 132 aa16.03■□□□□ 0.16
SPAST-204ENST00000621856 TRAV21A0A0B4J279 112 aa16.02■□□□□ 0.16
SPAST-204ENST00000621856 A0A1B0GUS0 222 aa16.02■□□□□ 0.16
SPAST-204ENST00000621856 RNASE4P34096 147 aaKnown RBP16.02■□□□□ 0.16
SPAST-204ENST00000621856 SLAQ13239 276 aa16.02■□□□□ 0.16
SPAST-204ENST00000621856 NDUFA11Q86Y39 141 aa16.02■□□□□ 0.16
SPAST-204ENST00000621856 IGKV3D-20A0A0C4DH25 116 aa16.02■□□□□ 0.15
SPAST-204ENST00000621856 DUSP14O95147 198 aaKnown RBP16.02■□□□□ 0.15
SPAST-204ENST00000621856 S100A8P05109 93 aa16.02■□□□□ 0.15
SPAST-204ENST00000621856 GFI1BQ5VTD9 330 aa16.02■□□□□ 0.15
SPAST-204ENST00000621856 Q6ZQT7 251 aa16.02■□□□□ 0.15
SPAST-204ENST00000621856 SETXQ7Z333 2677 aaKnown RBP16.02■□□□□ 0.15
SPAST-204ENST00000621856 SETD2Q9BYW2 2564 aaPredicted RBP16.02■□□□□ 0.15
SPAST-204ENST00000621856 A0A1B0GW15 77 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 IGKV3-20P01619 116 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 IGLC6P0CF74 106 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 LEPP41159 167 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 DEFB131AP59861 70 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 FOXI2Q6ZQN5 318 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 NAGKQ9UJ70 344 aa16.01■□□□□ 0.15
SPAST-204ENST00000621856 CTRLP40313 264 aa16■□□□□ 0.15
SPAST-204ENST00000621856 SSTP61278 116 aa16■□□□□ 0.15
SPAST-204ENST00000621856 PDZD11Q5EBL8 140 aa16■□□□□ 0.15
SPAST-204ENST00000621856 APRG1Q8IVJ8 170 aa16■□□□□ 0.15
SPAST-204ENST00000621856 SIGLEC8Q9NYZ4 499 aa16■□□□□ 0.15
SPAST-204ENST00000621856 TRAV25A0A0B4J276 109 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 OR4C46A6NHA9 309 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 COA6Q5JTJ3 125 aaKnown RBP15.99■□□□□ 0.15
SPAST-204ENST00000621856 PRR31Q5SQ13 230 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 ZNF575Q86XF7 245 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 HIST3H2BBQ8N257 126 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 ODF3Q96PU9 254 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 SPAG8Q99932 426 aaPredicted RBP15.99■□□□□ 0.15
SPAST-204ENST00000621856 WNK1Q9H4A3 2382 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 MUC21A0A0G2JKD1 596 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 MUC21A0A140T8X8 626 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 KIR3DS1Q14943 382 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 MUC21Q5SSG8 566 aa15.99■□□□□ 0.15
SPAST-204ENST00000621856 SRIP30626 198 aa15.98■□□□□ 0.15
SPAST-204ENST00000621856 KLLNB2CW77 178 aa15.97■□□□□ 0.15
SPAST-204ENST00000621856 S100A2P29034 98 aa15.97■□□□□ 0.15
SPAST-204ENST00000621856 KNCNA6PVL3 124 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms