RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 HEATR5AQ86XA9 2040 aa5.79□□□□□ -1.48
COLCA1-205ENST00000620864 IGKV1-9A0A0C4DH69 117 aa5.79□□□□□ -1.48
COLCA1-205ENST00000620864 WFDC11Q8NEX6 87 aa5.79□□□□□ -1.48
COLCA1-205ENST00000620864 UQCRQO14949 82 aa5.79□□□□□ -1.48
COLCA1-205ENST00000620864 PRR30Q53SZ7 412 aaPredicted RBP5.79□□□□□ -1.48
COLCA1-205ENST00000620864 MAPK1IP1LQ8NDC0 245 aa5.79□□□□□ -1.48
COLCA1-205ENST00000620864 CFHR4Q92496 578 aa5.79□□□□□ -1.48
COLCA1-205ENST00000620864 SPTAN1Q13813 2472 aaKnown RBP5.78□□□□□ -1.48
COLCA1-205ENST00000620864 TET1Q8NFU7 2136 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 A0A0A6YYD4 124 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 TRAV12-1A0A0B4J245 112 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 C15orf62A8K5M9 175 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 IGKV1-5P01602 117 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 CRYGSP22914 178 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 MRPL51Q4U2R6 128 aaKnown RBP5.78□□□□□ -1.48
COLCA1-205ENST00000620864 TMEM219Q86XT9 240 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 C11orf52Q96A22 123 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 TNRC6AQ8NDV7 1962 aaKnown RBP5.78□□□□□ -1.48
COLCA1-205ENST00000620864 NDUFC2-KCTD14E9PQ53 114 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 H0YJW9 148 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 IGHV1-3A0A0C4DH29 117 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 SDHAF1A6NFY7 115 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 NTF4P34130 210 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 RPL15P61313 204 aaKnown RBP5.78□□□□□ -1.48
COLCA1-205ENST00000620864 V9GYV3 84 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 IGHV3-53P01767 116 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 IGHV1-2P23083 117 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 ZFP2Q6ZN57 461 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 IGHV1-8P0DP01 117 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 MRPL35Q9NZE8 188 aaKnown RBP5.78□□□□□ -1.48
COLCA1-205ENST00000620864 PLCE1Q9P212 2302 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 SLC25A29Q8N8R3 303 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 TANC1Q9C0D5 1861 aa5.78□□□□□ -1.48
COLCA1-205ENST00000620864 DEFB130BP0DP73 79 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 DEFB130AP0DP74 79 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 CFHR2P36980 270 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 LENEPQ9Y5L5 61 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 NBASA2RRP1 2371 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 CCL25O15444 150 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 RNASE2P10153 161 aaKnown RBP5.77□□□□□ -1.49
COLCA1-205ENST00000620864 FOXF2Q12947 444 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 LINC00643Q86TS7 51 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 C8orf31Q8N9H6 132 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 F5H768 121 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 G3V4G9 280 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 MGAMO43451 1857 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 ZFP36L1Q07352 338 aaKnown RBP5.77□□□□□ -1.49
COLCA1-205ENST00000620864 LINC01356Q8N9X3 169 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 LYZL4Q96KX0 146 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 KLF2Q9Y5W3 355 aaPredicted RBP5.77□□□□□ -1.49
COLCA1-205ENST00000620864 TEX48A0A1B0GUV7 120 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 MST1P26927 711 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 C9orf106Q8NAJ2 232 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 INAFM1C9JVW0 142 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 DEFB113Q30KQ7 82 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 A0A0G2JMZ2 1700 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 LRRC37A2A6NM11 1700 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 SMKR1H3BMG3 65 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 EFNA4P52798 201 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 DKK4Q9UBT3 224 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 SIGLEC9Q9Y336 463 aa5.77□□□□□ -1.49
COLCA1-205ENST00000620864 IGLL5B9A064 214 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 IGLC1P0CG04 106 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 NREPQ16612 68 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 BRD3OSQ6XYD6 125 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 TINCRA0A1B0GVN0 87 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 ZFP36P26651 326 aaKnown RBP5.76□□□□□ -1.49
COLCA1-205ENST00000620864 FOXI1Q12951 378 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 SHISA2Q6UWI4 295 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 GFI1Q99684 422 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 OPRPNQ99935 248 aaPredicted RBP5.76□□□□□ -1.49
COLCA1-205ENST00000620864 ICOSQ9Y6W8 199 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 PCNX1Q96RV3 2341 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 RBAKDNA6NC62 111 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 TFF1P04155 84 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 RNF152Q8N8N0 203 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 ZGRF1Q86YA3 2104 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 NDUFS7O75251 213 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 C1QCP02747 245 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 PFN2P35080 140 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 FXYD7P58549 80 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 SIP14410 1827 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 MUC6Q6W4X9 2439 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 TRBV19A0A075B6N1 114 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 MRPL53Q96EL3 112 aaKnown RBP5.76□□□□□ -1.49
COLCA1-205ENST00000620864 A0A087WWL8 130 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 IGHV3-73A0A0B4J1V6 119 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 PIP4P2Q8N4L2 257 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 TMEM14BQ9NUH8 114 aa5.76□□□□□ -1.49
COLCA1-205ENST00000620864 H3BUX3 64 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 VMO1Q7Z5L0 202 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 IGKV1D-43A0A0B4J1Z2 117 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 PRSS29PA6NIE9 313 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 TMEM256-PLSCR3K7ERE1 68 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 C4orf48Q5BLP8 95 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 SH2D6Q7Z4S9 175 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms