RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HES1Q14469 280 aa8.13□□□□□ -1.11
VPS11-207ENST00000620429 AMN1Q8IY45 258 aa8.13□□□□□ -1.11
VPS11-207ENST00000620429 ONECUT1Q9UBC0 465 aa8.13□□□□□ -1.11
VPS11-207ENST00000620429 ARFGEF3Q5TH69 2177 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 TRAV8-1A0A0A6YYK1 113 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 TRBV7-7A0A0K0K1E9 115 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 SRRM5B3KS81 715 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 UPK2O00526 184 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 CECR9P0C854 216 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 RPL13AP40429 203 aaKnown RBP8.12□□□□□ -1.11
VPS11-207ENST00000620429 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 TMEM160Q9NX00 188 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 ANKRD11Q6UB99 2663 aaPredicted RBP8.12□□□□□ -1.11
VPS11-207ENST00000620429 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 CD7P09564 240 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 HOXB4P17483 251 aaPredicted RBP8.12□□□□□ -1.11
VPS11-207ENST00000620429 ORM2P19652 201 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 LEPP41159 167 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 Q8N1Y9 231 aa8.12□□□□□ -1.11
VPS11-207ENST00000620429 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
VPS11-207ENST00000620429 F5H768 121 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 DSCAMO60469 2012 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 IGKV3-15P01624 115 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 RNASE2P10153 161 aaKnown RBP8.11□□□□□ -1.11
VPS11-207ENST00000620429 HERVK_113P63121 156 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 TNFAIP6P98066 277 aaPredicted RBP8.11□□□□□ -1.11
VPS11-207ENST00000620429 C17orf58Q2M2W7 97 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 ZNF474Q6S9Z5 364 aaPredicted RBP8.11□□□□□ -1.11
VPS11-207ENST00000620429 Q6ZT83 130 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 TMEM219Q86XT9 240 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 MRAPQ8TCY5 172 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 ACACAQ13085 2346 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 TRAV2A0A0B4J234 112 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 IGLV2-11P01706 119 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 MZT1Q08AG7 82 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 AAMDCQ9H7C9 122 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 MRPL35Q9NZE8 188 aaKnown RBP8.11□□□□□ -1.11
VPS11-207ENST00000620429 ITPR1Q14643 2758 aa8.11□□□□□ -1.11
VPS11-207ENST00000620429 PLNP26678 52 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 CKS2P33552 79 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 C9orf153Q5TBE3 101 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 IGFL2Q6UWQ7 119 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 LINC00305Q7Z4B0 112 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 ZNRF2Q8NHG8 242 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 ATMQ13315 3056 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 NAV3Q8IVL0 2385 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 PLAUP00749 431 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
VPS11-207ENST00000620429 FAM201AQ5SY85 155 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 MYOZ3Q8TDC0 251 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 DUX5Q96PT3 197 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 Q9H3A6 140 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 NXT2Q9NPJ8 142 aaKnown RBP8.1□□□□□ -1.11
VPS11-207ENST00000620429 IGSF10Q6WRI0 2623 aa8.1□□□□□ -1.11
VPS11-207ENST00000620429 TRAV17A0A0B4J275 112 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 OOSP1A8MZH6 123 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 K7EM74 188 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 TIMM23O14925 209 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 UQCRQO14949 82 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 IGHV3-48P01763 117 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 IGLC6P0CF74 106 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 CGB3P0DN86 165 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 CGB7P0DN87 165 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 MRPL20Q9BYC9 149 aaKnown RBP8.09□□□□□ -1.11
VPS11-207ENST00000620429 DMXL2Q8TDJ6 3036 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 SMG1Q96Q15 3661 aaKnown RBP8.09□□□□□ -1.11
VPS11-207ENST00000620429 F8WDY8 70 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 SAA1P0DJI8 122 aaPredicted RBP8.09□□□□□ -1.11
VPS11-207ENST00000620429 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 ZNRD1Q9P1U0 126 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 RP1L1Q8IWN7 2480 aaPredicted RBP8.09□□□□□ -1.11
VPS11-207ENST00000620429 INTS1Q8N201 2190 aaKnown RBP8.09□□□□□ -1.11
VPS11-207ENST00000620429 APC2O95996 2303 aa8.09□□□□□ -1.11
VPS11-207ENST00000620429 ERHP84090 104 aaKnown RBP8.09□□□□□ -1.12
VPS11-207ENST00000620429 DUX4L9Q6RFH8 374 aaPredicted RBP8.09□□□□□ -1.12
VPS11-207ENST00000620429 KIR2DL5BQ8NHK3 375 aa8.09□□□□□ -1.12
VPS11-207ENST00000620429 NTN5Q8WTR8 489 aaPredicted RBP8.09□□□□□ -1.12
VPS11-207ENST00000620429 TIMD4Q96H15 378 aa8.09□□□□□ -1.12
VPS11-207ENST00000620429 SLC25A39Q9BZJ4 359 aaPredicted RBP8.09□□□□□ -1.12
VPS11-207ENST00000620429 EMP1P54849 157 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 TEX36Q5VZQ5 186 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 SEM1Q6ZVN7 128 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 C10orf126Q8N4M7 172 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 IMUPQ9GZP8 106 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 FASNP49327 2511 aaKnown RBP8.08□□□□□ -1.12
VPS11-207ENST00000620429 ZZEF1O43149 2961 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 FAM240AA0A1B0GVK7 77 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 LGALS9O00182 355 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 GP9P14770 177 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 LYZL1Q6UWQ5 148 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 THAP8Q8NA92 274 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 OTORQ9NRC9 128 aa8.08□□□□□ -1.12
VPS11-207ENST00000620429 COL6A6A6NMZ7 2263 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms