RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 STHQ8IWL8 128 aa5.92□□□□□ -1.46
CPNE3-209ENST00000620393 DEFB125Q8N687 156 aa5.92□□□□□ -1.46
CPNE3-209ENST00000620393 Q8TAT8 98 aa5.92□□□□□ -1.46
CPNE3-209ENST00000620393 ASCL2Q99929 193 aa5.92□□□□□ -1.46
CPNE3-209ENST00000620393 NDFIP1Q9BT67 221 aa5.92□□□□□ -1.46
CPNE3-209ENST00000620393 CMYA5Q8N3K9 4069 aa5.92□□□□□ -1.46
CPNE3-209ENST00000620393 PGPEP1LA6NFU8 196 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 GCGP01275 180 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 TSPOP30536 169 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 LEPP41159 167 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
CPNE3-209ENST00000620393 PNRC1Q12796 327 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-209ENST00000620393 SMUG1Q53HV7 270 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 TRPT1Q86TN4 253 aaKnown RBP5.91□□□□□ -1.46
CPNE3-209ENST00000620393 LINC01551Q86U37 167 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 ZFAND2AQ8N6M9 145 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 WFDC10AQ9H1F0 79 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 BIN3Q9NQY0 253 aa5.91□□□□□ -1.46
CPNE3-209ENST00000620393 AURKAIP1Q9NWT8 199 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-209ENST00000620393 RBMY1BA6NDE4 496 aaKnown RBP5.9□□□□□ -1.46
CPNE3-209ENST00000620393 RBMY1EA6NEQ0 496 aaKnown RBP5.9□□□□□ -1.46
CPNE3-209ENST00000620393 KLLNB2CW77 178 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 K7EN84 100 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 APOC3P02656 99 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 RBMY1DP0C7P1 496 aaKnown RBP5.9□□□□□ -1.46
CPNE3-209ENST00000620393 MGST1P10620 155 aaKnown RBP5.9□□□□□ -1.46
CPNE3-209ENST00000620393 S100A1P23297 94 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 CDKN1BP46527 198 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 CRIP1P50238 77 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 OR5I1Q13606 314 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 KPRPQ5T749 579 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-209ENST00000620393 NHLRC2Q8NBF2 726 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 ZC2HC1AQ96GY0 325 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 C8orf49Q96NF6 230 aa5.9□□□□□ -1.46
CPNE3-209ENST00000620393 FABP5P3A8MUU1 101 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 A8MZ25 164 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 ATP6V1G1O75348 118 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 AMBPP02760 352 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 GPX1P07203 203 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 RPL35AP18077 110 aaKnown RBP5.89□□□□□ -1.47
CPNE3-209ENST00000620393 RNASE4P34096 147 aaKnown RBP5.89□□□□□ -1.47
CPNE3-209ENST00000620393 ZNF80P51504 273 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-209ENST00000620393 NUTF2P61970 127 aaKnown RBP5.89□□□□□ -1.47
CPNE3-209ENST00000620393 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 ADIRFQ15847 76 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 SPINK13Q1W4C9 94 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 MORN3Q6PF18 240 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-209ENST00000620393 LINC00322Q6ZN03 302 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-209ENST00000620393 SVBPQ8N300 66 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 ISOC2Q96AB3 205 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 TUBA4BQ9H853 241 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
CPNE3-209ENST00000620393 LOC102724200A0A096LPH7 203 aaPredicted RBP5.88□□□□□ -1.47
CPNE3-209ENST00000620393 C7orf71A4D174 169 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 C19orf71A6NCJ1 209 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 B4DEV8 164 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 J3KRW8 73 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 M0R036 132 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 M0R2Z0 102 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 CRXO43186 299 aaPredicted RBP5.88□□□□□ -1.47
CPNE3-209ENST00000620393 ZNF324O75467 553 aaPredicted RBP5.88□□□□□ -1.47
CPNE3-209ENST00000620393 SNAPINO95295 136 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 GIG44P09565 113 aaPredicted RBP5.88□□□□□ -1.47
CPNE3-209ENST00000620393 FXYD7P58549 80 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 FAM162BQ5T6X4 162 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 PRR9Q5T870 116 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 Q6AWC8 147 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 FAM231DQ6ZW35 169 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 CLRN3Q8NCR9 226 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 NUDT10Q8NFP7 164 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 DAZAP1Q96EP5 407 aaKnown RBP5.88□□□□□ -1.47
CPNE3-209ENST00000620393 NUDT11Q96G61 164 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 CSTL1Q9H114 145 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 OSTCQ9NRP0 149 aa5.88□□□□□ -1.47
CPNE3-209ENST00000620393 TRAV12-2A0A075B6T6 113 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 TRAV21A0A0B4J279 112 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 KIR2DL5BA0A0G2JN68 375 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 KIR2DL5BA0A0G2JPC4 375 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 C7orf77A4D0Y5 90 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 SH2D1AO60880 128 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 MT-ND4LP03901 98 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 PFN1P07737 140 aaKnown RBP5.87□□□□□ -1.47
CPNE3-209ENST00000620393 IGHV4-30-4P0DP06 118 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 ERVFC1-1P60608 527 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 BTN1A1Q13410 526 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 GFI1BQ5VTD9 330 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 PRR27Q6MZM9 219 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 KIR2DL5AQ8N109 375 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 OR10G8Q8NGN5 311 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 KIR2DL5BQ8NHK3 375 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 SFRP2Q96HF1 295 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 RNASE7Q9H1E1 156 aaKnown RBP5.87□□□□□ -1.47
CPNE3-209ENST00000620393 XCL2Q9UBD3 114 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 DNHD1Q96M86 4753 aa5.87□□□□□ -1.47
CPNE3-209ENST00000620393 TRAV12-3A0A0B4J271 114 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 UBE2CO00762 179 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 PPP1R2P9O14990 202 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 GATCO43716 136 aaKnown RBP5.86□□□□□ -1.47
CPNE3-209ENST00000620393 P01737 135 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms