RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ERCC8Q13216 396 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 VMO1Q7Z5L0 202 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 WFDC3Q8IUB2 231 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 FAM110DQ8TAY7 271 aaPredicted RBP10.04□□□□□ -0.8
SKP2-209ENST00000620197 CHTOPQ9Y3Y2 248 aaKnown RBP10.04□□□□□ -0.8
SKP2-209ENST00000620197 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 CENPVL3A0A0U1RRI6 287 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 GRNP28799 593 aaKnown RBP10.04□□□□□ -0.8
SKP2-209ENST00000620197 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 CCDC140Q96MF4 163 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 SH3BGRL2Q9UJC5 107 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 ARHGAP32A7KAX9 2087 aa10.04□□□□□ -0.8
SKP2-209ENST00000620197 IGHV3-23P01764 117 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 IGKCP01834 107 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 GATA1P15976 413 aaPredicted RBP10.03□□□□□ -0.8
SKP2-209ENST00000620197 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 MAP1AP78559 2803 aaPredicted RBP10.03□□□□□ -0.8
SKP2-209ENST00000620197 TEX48A0A1B0GUV7 120 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 ATP5LO75964 103 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 TRGV3P03979 118 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 RAB9AP51151 201 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 C9orf47Q6ZRZ4 202 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 SIRPDQ9H106 197 aa10.03□□□□□ -0.8
SKP2-209ENST00000620197 K7ERJ3 54 aa10.02□□□□□ -0.8
SKP2-209ENST00000620197 LINC01560Q8TB33 94 aa10.02□□□□□ -0.8
SKP2-209ENST00000620197 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 E9PLD3 99 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 TCF15Q12870 199 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 TMEM158Q8WZ71 300 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 SLC50A1Q9BRV3 221 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 HIF1ANQ9NWT6 349 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 RNF223E7ERA6 249 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 FABP2P12104 132 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 TAL2Q16559 108 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 CEND1Q8N111 149 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 APC2O95996 2303 aa10.02□□□□□ -0.81
SKP2-209ENST00000620197 SMIM13P0DJ93 91 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 LY6HO94772 140 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 MAPKAPK5-AS1Q8N8E1 139 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 A0A1W2PRD5 423 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 A0A1W2PRF3 423 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 A0A1W2PRM7 423 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 TMEM8BA6NDV4 472 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 DPM2O94777 84 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
SKP2-209ENST00000620197 CDSNQ15517 529 aa10.01□□□□□ -0.81
SKP2-209ENST00000620197 ITLN2Q8WWU7 325 aaPredicted RBP10.01□□□□□ -0.81
SKP2-209ENST00000620197 A0A087WX48 190 aa10□□□□□ -0.81
SKP2-209ENST00000620197 ORM1P02763 201 aa10□□□□□ -0.81
SKP2-209ENST00000620197 GCSHP23434 173 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 C15orf32Q32M92 178 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 POM121L12Q8N7R1 296 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 ATP6V0BQ99437 205 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 FOXI2Q6ZQN5 318 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 FAM19A4Q96LR4 140 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 AGRNO00468 2067 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 VPS13CQ709C8 3753 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 LAGE3Q14657 143 aa9.99□□□□□ -0.81
SKP2-209ENST00000620197 ASH1LQ9NR48 2969 aaKnown RBP9.99□□□□□ -0.81
SKP2-209ENST00000620197 K7EMI3 77 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 HES1Q14469 280 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 FOXC2Q99958 501 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
SKP2-209ENST00000620197 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
SKP2-209ENST00000620197 CEP295Q9C0D2 2601 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 CIDEAO60543 219 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 TMEM11P17152 192 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 Q6ZQT7 251 aa9.98□□□□□ -0.81
SKP2-209ENST00000620197 K7ENP7 123 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
SKP2-209ENST00000620197 PRR9Q5T870 116 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 GTSCR1Q86UQ5 136 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 NCBP2LA6PVI3 153 aaKnown RBP9.97□□□□□ -0.81
SKP2-209ENST00000620197 GOSR1O95249 250 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 APRG1Q8IVJ8 170 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 SOCS3O14543 225 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 CLEC3BP05452 202 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 SLC25A16P16260 332 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 PLNP26678 52 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 C8orf86Q6ZUL3 223 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 GPHB5Q86YW7 130 aa9.97□□□□□ -0.81
SKP2-209ENST00000620197 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.81
SKP2-209ENST00000620197 IGLL5B9A064 214 aa9.96□□□□□ -0.81
SKP2-209ENST00000620197 ATP6V0E1O15342 81 aa9.96□□□□□ -0.81
SKP2-209ENST00000620197 PPIFP30405 207 aaKnown RBP9.96□□□□□ -0.81
SKP2-209ENST00000620197 TIMD4Q96H15 378 aa9.96□□□□□ -0.81
SKP2-209ENST00000620197 AZU1P20160 251 aa9.96□□□□□ -0.82
SKP2-209ENST00000620197 SAMD13Q5VXD3 122 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms